EST details — SGN-E260640
Search information |
Request: 260640 | Match: SGN-E260640 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C40667 | Clone name: cLEG-54-K9 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E260640 | Length: 797 bp (871 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E260640 [] (trimmed)
AGCAAACTTTATCTATATTGCTGATATTTACATTACAAAAAAAGATTCAAACTCATTGCCAAAATCCCAAAAAAACCTACCTACTATATTGCTAA
TGAAAGAAAAAAAGATTTAAGGCAAAGCATTGGCCAAGCCTACTTCTTGATATCTGCCAAGTAAATTGGCTGCAATTAGACTCACATCCTCTAAA
CCAACCCCAATACATAGAGAGTTACTTGTAGTTGGAGCAGAGCTAACAGCAACCGAGTCACCGGCTTGGAAGGCGTCCGAGATGCTGCTGCTGCT
ACACCCTGAAACTTTGACATTAGGACCAACTTTACACTTTCCCATGCATTTGCAACCAGAGACTGCAGCTTCAATCCCAGCAACGCGTTGGAATT
CTTCTAGTAACGCTCCAGCGCCCAATCGCTTGCATTTACCACCCATACATACTTCGATTCTCTTTGTACCCTCTGCTGTTGTCGTTGTAGCTGCT
GCTATAGATGATACATTAGACCTAGTGCCTGGTGTGATACTGCTGCCTACATTGCCAATGTGACAATCACTAGCTTCCAAGCAGCATTCGCCTTT
TTGTTCAGGGACTGAAAACTCAAAACTTGTCGTCTTCCCAGTTGATTCCTCCGTGGTAGTTGATGGCATGCTTGAGATCTCTACTGTTGTATCGA
CTTCTGGAGTTGAAAGGGAAGGGTTTAGTGTTGCATTATCAAGTGCTCGATCACACGCTTCAGGAATTGTTTGAGCAAGTGTTCCGATTTTCAGG
CTTTTCATGTCAACCAAATTTTGACATTCATCATCAC
TGAAAGAAAAAAAGATTTAAGGCAAAGCATTGGCCAAGCCTACTTCTTGATATCTGCCAAGTAAATTGGCTGCAATTAGACTCACATCCTCTAAA
CCAACCCCAATACATAGAGAGTTACTTGTAGTTGGAGCAGAGCTAACAGCAACCGAGTCACCGGCTTGGAAGGCGTCCGAGATGCTGCTGCTGCT
ACACCCTGAAACTTTGACATTAGGACCAACTTTACACTTTCCCATGCATTTGCAACCAGAGACTGCAGCTTCAATCCCAGCAACGCGTTGGAATT
CTTCTAGTAACGCTCCAGCGCCCAATCGCTTGCATTTACCACCCATACATACTTCGATTCTCTTTGTACCCTCTGCTGTTGTCGTTGTAGCTGCT
GCTATAGATGATACATTAGACCTAGTGCCTGGTGTGATACTGCTGCCTACATTGCCAATGTGACAATCACTAGCTTCCAAGCAGCATTCGCCTTT
TTGTTCAGGGACTGAAAACTCAAAACTTGTCGTCTTCCCAGTTGATTCCTCCGTGGTAGTTGATGGCATGCTTGAGATCTCTACTGTTGTATCGA
CTTCTGGAGTTGAAAGGGAAGGGTTTAGTGTTGCATTATCAAGTGCTCGATCACACGCTTCAGGAATTGTTTGAGCAAGTGTTCCGATTTTCAGG
CTTTTCATGTCAACCAAATTTTGACATTCATCATCAC
Unigenes |
Current Unigene builds | |||||
[SGN-E260640] | SGN-U579250 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T75258 [Download] [View] | Facility Assigned ID: TBFIE65TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |