EST details — SGN-E260788
Search information |
Request: 260788 | Match: SGN-E260788 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C40918 | Clone name: cLEG-55-I16 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C188466 [TUS-55-E8] | Trace: SGN-T351985 | EST: SGN-E551110 | Direction: 5' | Facility: Giovanni |
Sequence |
Sequence Id: SGN-E260788 | Length: 731 bp (937 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E260788 [] (trimmed)
AAGATGTATCTACAAGGATTTTGACTACTTCAAGAGTGGAAGTAGACGGCAACACTGATAATGATTCTGCGGTGTTCCATCCCTTTGAATTTTCT
TCAGCATCTCCTCCATCCATCATGACTGAGGGCTCTCAAAGTGGCTCTTGGAGGAAAAAGATCACTGACTTAGATGGAACTGAAGATGAGAAGGA
CATGCCTTGGTGGGTTATAGACTGTGTGATGAACAATCGTCTGCCTCCCAGGGAAAATACCAAATGTAGCTTTTATTTTCATCCATGTGAGGGTT
CTACTGTCCAGATCCTTACCCAAGGCAAACTGAGTGCACCTCGCATATTAAGAATTCACAAAGTTATCAATTATGTCGTGGAAAAGTTGGTTCTT
GACAAGCCTTTGGATAGCGTAAACTCGGATGGGACTTTTGCTCCTGGTTTACATGGAACTACTGGAGTGGATGACTCATCCCGGATTGGGCCGAA
GCCTTCGCAAAAGCATAAGCCATCTATAGAGATCCTGTGCAATAACCAGGTTTTATCCCCTGAAATGAGCTTAGCAACTGTACGGGCCTATATAT
GGAAGAAACCTGAAGATCTTGTACTTAATTACCGTCTGTTGCCAAGCAAGTGACAGGCCTGAAAGTTATAAAGTTCGGAGTGGCTTGAAATAATG
GGTCTCTGTCCATACAGAATACTTCTGAGGGTACGCAATCTGCTATGGTGCTTGCTGCTGGCGTTA
TCAGCATCTCCTCCATCCATCATGACTGAGGGCTCTCAAAGTGGCTCTTGGAGGAAAAAGATCACTGACTTAGATGGAACTGAAGATGAGAAGGA
CATGCCTTGGTGGGTTATAGACTGTGTGATGAACAATCGTCTGCCTCCCAGGGAAAATACCAAATGTAGCTTTTATTTTCATCCATGTGAGGGTT
CTACTGTCCAGATCCTTACCCAAGGCAAACTGAGTGCACCTCGCATATTAAGAATTCACAAAGTTATCAATTATGTCGTGGAAAAGTTGGTTCTT
GACAAGCCTTTGGATAGCGTAAACTCGGATGGGACTTTTGCTCCTGGTTTACATGGAACTACTGGAGTGGATGACTCATCCCGGATTGGGCCGAA
GCCTTCGCAAAAGCATAAGCCATCTATAGAGATCCTGTGCAATAACCAGGTTTTATCCCCTGAAATGAGCTTAGCAACTGTACGGGCCTATATAT
GGAAGAAACCTGAAGATCTTGTACTTAATTACCGTCTGTTGCCAAGCAAGTGACAGGCCTGAAAGTTATAAAGTTCGGAGTGGCTTGAAATAATG
GGTCTCTGTCCATACAGAATACTTCTGAGGGTACGCAATCTGCTATGGTGCTTGCTGCTGGCGTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E260788] | SGN-U584242 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T75406 [Download] [View] | Facility Assigned ID: TBFIJ56TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.983 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |