EST details — SGN-E265075
| Search information |
| Request: 265075 | Match: SGN-E265075 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C47937 | Clone name: cLEI-2-N11 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C188754 [TUS-56-A8] | Trace: SGN-T338298 | EST: SGN-E537423 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C188754 [TUS-56-A8] | Trace: SGN-T338301 | EST: SGN-E537426 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E265075 | Length: 532 bp (727 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E265075 [] (trimmed)
TGTTCTTTCTTGAATTTCATTATATATAATGGCAAGCAGACGATCACGTTCCAGAATAAGCGATGATCAAATCGCTGATCTTGTTTCCAAGTTGC
AACAACTTATCCCTGAAATTCGTAATAGACGTTCTGACAAGGTTTCAGCTTCAAAAGTGCTTCAAGAAACTTGCAACTATATAAGAAATTTACAC
AGAGAAGTGGATGGATTAAGTGAGAGATTATCACAACTTTTGGAATCAACTGATAGTGATAGTGCTCAAGCTGCTATTATTAGAAGCTTACTTAT
GTAGTAGCTATTTAATTAAATAGCTCAAACTTCATTAAAATTTCTATTATTAAAAAAAGATGGAGCATTTATATTATTAATTAGGGTTTTTTTGG
CCACTATAGGTCAAAATTAATTTCTATTTTTCTGTTTTCCAATTTTGAATAGTTCTTTTTTTTTCTTTTACTTTGTGTTGTATTGTTGTATCCAT
CTGTTTTAAGAGCTGATGTTTCTTTGATCTCAGCCTTTNTTAAGTATATAAGTATTT
AACAACTTATCCCTGAAATTCGTAATAGACGTTCTGACAAGGTTTCAGCTTCAAAAGTGCTTCAAGAAACTTGCAACTATATAAGAAATTTACAC
AGAGAAGTGGATGGATTAAGTGAGAGATTATCACAACTTTTGGAATCAACTGATAGTGATAGTGCTCAAGCTGCTATTATTAGAAGCTTACTTAT
GTAGTAGCTATTTAATTAAATAGCTCAAACTTCATTAAAATTTCTATTATTAAAAAAAGATGGAGCATTTATATTATTAATTAGGGTTTTTTTGG
CCACTATAGGTCAAAATTAATTTCTATTTTTCTGTTTTCCAATTTTGAATAGTTCTTTTTTTTTCTTTTACTTTGTGTTGTATTGTTGTATCCAT
CTGTTTTAAGAGCTGATGTTTCTTTGATCTCAGCCTTTNTTAAGTATATAAGTATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E265075] | SGN-U568309 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T79689 [Download] [View] | Facility Assigned ID: TGSAG78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.917 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 12.5 |
Working
