EST details — SGN-E265338
| Search information |
| Request: 265338 | Match: SGN-E265338 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C49887 | Clone name: cLEI-9-P5 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189030 [TUS-56-L20] | Trace: SGN-T338774 | EST: SGN-E537899 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C189030 [TUS-56-L20] | Trace: SGN-T348842 | EST: SGN-E547967 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E265338 | Length: 609 bp (805 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E265338 [] (trimmed)
TGCAGCTCAGTGTTTGCAGAAATTGCCCTCTTCAAATAATAAGTTCACTTATAATTGTGATCATCATACTTTTAACTTCCTTGTTCAAGATGGTT
ATGCTTATTGTGTAGTTTCCAAAGAATCTGTGGGCAAGCAAATTTCTATTGCATTTTTGGAACGTGTGAGAGCTGATTTTAATAAAAGATATGGT
GGTGGTAAAGCAGATACGGCTGTGGCTAAAAGTCTTAATAAAGAGTTCGGACCTGTCATGAAAGAACACATGCAGTATATAATTGACCACGCTGA
CGAGATTGAGAAACTACTAAAAGTTAAAGCCCAAGTGTCTGAAGTCAAAAGTATTATGTTGGAGAATATTGACAAGGCCATTGAAAGAGGGGAAG
ACTTGACTATACTATCTGGCAAGACTGAGAACCTGCGTGATTCGGCCCTTGAATTCAAGACAAAGGGGACTCAAATACGGCGGAAGATGTGGTAT
CAGAATATGAAAATAAAGTTGGTTGTGTTTGGCATCATCCTGCTATTGGTTCTTATAATCTGGCTTTCAATTTGTCGTGGCTTCAATTGCACGAA
CTAGCATATCAATGCACACAGTTGGGGACCGAATTCATA
ATGCTTATTGTGTAGTTTCCAAAGAATCTGTGGGCAAGCAAATTTCTATTGCATTTTTGGAACGTGTGAGAGCTGATTTTAATAAAAGATATGGT
GGTGGTAAAGCAGATACGGCTGTGGCTAAAAGTCTTAATAAAGAGTTCGGACCTGTCATGAAAGAACACATGCAGTATATAATTGACCACGCTGA
CGAGATTGAGAAACTACTAAAAGTTAAAGCCCAAGTGTCTGAAGTCAAAAGTATTATGTTGGAGAATATTGACAAGGCCATTGAAAGAGGGGAAG
ACTTGACTATACTATCTGGCAAGACTGAGAACCTGCGTGATTCGGCCCTTGAATTCAAGACAAAGGGGACTCAAATACGGCGGAAGATGTGGTAT
CAGAATATGAAAATAAAGTTGGTTGTGTTTGGCATCATCCTGCTATTGGTTCTTATAATCTGGCTTTCAATTTGTCGTGGCTTCAATTGCACGAA
CTAGCATATCAATGCACACAGTTGGGGACCGAATTCATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E265338] | SGN-U574473 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T81619 [Download] [View] | Facility Assigned ID: TGSBI87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
