EST details — SGN-E266594
| Search information |
| Request: 266594 | Match: SGN-E266594 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C48780 | Clone name: cLEI-5-N12 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C188887 [TUS-56-F21] | Trace: SGN-T338526 | EST: SGN-E537651 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C188887 [TUS-56-F21] | Trace: SGN-T338528 | EST: SGN-E537653 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E266594 | Length: 538 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E266594 [] (trimmed)
GAAATATTTAGGGAGATTAAAGGTCCAAAGATGGTTATGAATATCCTAAACAATAGGAAAGAAAACATAAGTATCTTGAACAGTGGATTCGCTGT
TGTTTCTGCCGCTGCAACTGGGAATGAGGTCCTCAAGGAGGCATTTATGAACTTGAAAATTGATGAGCTGATTCTTCAATGTCTAAGAGAATTTA
GTACGGGGAGCATTCCTTGTTTATATGATGCTGTACATGTCCTGCTAACCTCTGATGATAATCGTGTGGTGGCCTCTGAAGTTTATGGGTATGCC
AGAAGGTTTGCAAAAATAGGAATTGTTGAAGCACTTGTTGATTCACTTCATGATGGGATCAAGGCGTCTAGTCTGGTGTCTGCAAGTGTTGCTTT
AAAGGCTATTGCTGTTAATGATGAGATATGCAGAGCTGCTGCTGAAAATGGTGGTATAGACGCAATTCTTCGATGTATACATGACAGCAGTGAAC
AGGGTGAAAAAGTTGTAGCCATAACTTGCTGCTCCTTATTATCTAAGTTGGCATGAAGTGACA
TGTTTCTGCCGCTGCAACTGGGAATGAGGTCCTCAAGGAGGCATTTATGAACTTGAAAATTGATGAGCTGATTCTTCAATGTCTAAGAGAATTTA
GTACGGGGAGCATTCCTTGTTTATATGATGCTGTACATGTCCTGCTAACCTCTGATGATAATCGTGTGGTGGCCTCTGAAGTTTATGGGTATGCC
AGAAGGTTTGCAAAAATAGGAATTGTTGAAGCACTTGTTGATTCACTTCATGATGGGATCAAGGCGTCTAGTCTGGTGTCTGCAAGTGTTGCTTT
AAAGGCTATTGCTGTTAATGATGAGATATGCAGAGCTGCTGCTGAAAATGGTGGTATAGACGCAATTCTTCGATGTATACATGACAGCAGTGAAC
AGGGTGAAAAAGTTGTAGCCATAACTTGCTGCTCCTTATTATCTAAGTTGGCATGAAGTGACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E266594] | SGN-U575465 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T80566 [Download] [View] | Facility Assigned ID: TGSAT78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 14.5 |
Working
