EST details — SGN-E266594
Search information |
Request: 266594 | Match: SGN-E266594 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C48780 | Clone name: cLEI-5-N12 |
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Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C188887 [TUS-56-F21] | Trace: SGN-T338526 | EST: SGN-E537651 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C188887 [TUS-56-F21] | Trace: SGN-T338528 | EST: SGN-E537653 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E266594 | Length: 538 bp (876 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E266594 [] (trimmed)
GAAATATTTAGGGAGATTAAAGGTCCAAAGATGGTTATGAATATCCTAAACAATAGGAAAGAAAACATAAGTATCTTGAACAGTGGATTCGCTGT
TGTTTCTGCCGCTGCAACTGGGAATGAGGTCCTCAAGGAGGCATTTATGAACTTGAAAATTGATGAGCTGATTCTTCAATGTCTAAGAGAATTTA
GTACGGGGAGCATTCCTTGTTTATATGATGCTGTACATGTCCTGCTAACCTCTGATGATAATCGTGTGGTGGCCTCTGAAGTTTATGGGTATGCC
AGAAGGTTTGCAAAAATAGGAATTGTTGAAGCACTTGTTGATTCACTTCATGATGGGATCAAGGCGTCTAGTCTGGTGTCTGCAAGTGTTGCTTT
AAAGGCTATTGCTGTTAATGATGAGATATGCAGAGCTGCTGCTGAAAATGGTGGTATAGACGCAATTCTTCGATGTATACATGACAGCAGTGAAC
AGGGTGAAAAAGTTGTAGCCATAACTTGCTGCTCCTTATTATCTAAGTTGGCATGAAGTGACA
TGTTTCTGCCGCTGCAACTGGGAATGAGGTCCTCAAGGAGGCATTTATGAACTTGAAAATTGATGAGCTGATTCTTCAATGTCTAAGAGAATTTA
GTACGGGGAGCATTCCTTGTTTATATGATGCTGTACATGTCCTGCTAACCTCTGATGATAATCGTGTGGTGGCCTCTGAAGTTTATGGGTATGCC
AGAAGGTTTGCAAAAATAGGAATTGTTGAAGCACTTGTTGATTCACTTCATGATGGGATCAAGGCGTCTAGTCTGGTGTCTGCAAGTGTTGCTTT
AAAGGCTATTGCTGTTAATGATGAGATATGCAGAGCTGCTGCTGAAAATGGTGGTATAGACGCAATTCTTCGATGTATACATGACAGCAGTGAAC
AGGGTGAAAAAGTTGTAGCCATAACTTGCTGCTCCTTATTATCTAAGTTGGCATGAAGTGACA
Unigenes |
Current Unigene builds | |||||
[SGN-E266594] | SGN-U575465 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T80566 [Download] [View] | Facility Assigned ID: TGSAT78TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.959 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 14.5 |