EST details — SGN-E267635
Search information |
Request: 267635 | Match: SGN-E267635 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C49497 | Clone name: cLEI-8-H18 |
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Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C188981 [TUS-56-J19] | Trace: SGN-T338687 | EST: SGN-E537812 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C188981 [TUS-56-J19] | Trace: SGN-T338690 | EST: SGN-E537815 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E267635 | Length: 374 bp (746 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E267635 [] (trimmed)
CTCACAATTGAATTTACTCAAAGATTTAAAAGAGCAGAAATTGTTGAACAAACAAAGAAAACTAATTACTTTACATATCAATGAACTTGCATGAC
TATCAAGTACCTATGTTTTAAAGATTTTAAACCAAATCATCAAGCGTTCCATTAGCACAGAACAATAATTAACAGAACAACCGGTCAATCATCTT
TCCACAATCAAGATCTTTTTCCCTAACTTGCTTGGGATTGAGGCATAGTTGATGCAATACTATCTTCACCGAGTGTTCTCACGGCGTCTCACATA
ACGTGTACGGACGATATATATGGGTCTGTCTTGAGCTCTCTGGGGTACTGGCTCCACTCTCTTTAGTCTTTCAGGTGATCTTTGAACTA
TATCAAGTACCTATGTTTTAAAGATTTTAAACCAAATCATCAAGCGTTCCATTAGCACAGAACAATAATTAACAGAACAACCGGTCAATCATCTT
TCCACAATCAAGATCTTTTTCCCTAACTTGCTTGGGATTGAGGCATAGTTGATGCAATACTATCTTCACCGAGTGTTCTCACGGCGTCTCACATA
ACGTGTACGGACGATATATATGGGTCTGTCTTGAGCTCTCTGGGGTACTGGCTCCACTCTCTTTAGTCTTTCAGGTGATCTTTGAACTA
Unigenes |
Current Unigene builds | |||||
[SGN-E267635] | SGN-U576315 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T81507 [Download] [View] | Facility Assigned ID: TGSBF45TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0236 | Quality Trim Threshold: 14.5 |