EST details — SGN-E268147
Search information |
Request: 268147 | Match: SGN-E268147 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C47278 | Clone name: cLEI-15-K4 |
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Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189210 [TUS-57-D8] | Trace: SGN-T339060 | EST: SGN-E538185 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C189210 [TUS-57-D8] | Trace: SGN-T339063 | EST: SGN-E538188 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E268147 | Length: 461 bp (894 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268147 [] (trimmed)
AGTTCTCTTCATCAATGGCGGCAAAGAACGTAGCCCAATCAACCTTCCCACTCCAAGATCGTGTGGCCATTGTTACCGGTTCTTCTCGCGGAATC
AGCAAAGCAATTGCACTTCATTTGGCCTCACTTGGTGCTAAACTCGTCATCAACTATTCCTCCAACTCCACTCAAGCTGACGACGTCGTATACCA
GATCAATTCCACCTCCGGTTACCCACGTGCCATTGCGGTCAAGGCCAATATCTCAGATCCAGATCAAGTGAAATCCCTCTTTGACGCTGCTGAAT
CGGCTTTTCAATCGCCGGTCAACATCCTGGTAAACTCCGCCGGGGTACTCTACGGAAAATACCCGTCAATCCTAAACACAACCCTAGAGGATTTC
GACAGGACTTTTGATGTGAACGCTCGTGGAGCTTTCGTATGCTGCAAGGAAGGTGCTCAGAGAATCAAACACGGTGGAGGA
AGCAAAGCAATTGCACTTCATTTGGCCTCACTTGGTGCTAAACTCGTCATCAACTATTCCTCCAACTCCACTCAAGCTGACGACGTCGTATACCA
GATCAATTCCACCTCCGGTTACCCACGTGCCATTGCGGTCAAGGCCAATATCTCAGATCCAGATCAAGTGAAATCCCTCTTTGACGCTGCTGAAT
CGGCTTTTCAATCGCCGGTCAACATCCTGGTAAACTCCGCCGGGGTACTCTACGGAAAATACCCGTCAATCCTAAACACAACCCTAGAGGATTTC
GACAGGACTTTTGATGTGAACGCTCGTGGAGCTTTCGTATGCTGCAAGGAAGGTGCTCAGAGAATCAAACACGGTGGAGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E268147] | SGN-U571019 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T83094 [Download] [View] | Facility Assigned ID: TGSCF62TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0209 | Quality Trim Threshold: 14.5 |