EST details — SGN-E268597
Search information |
Request: 268597 | Match: SGN-E268597 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C46844 | Clone name: cLEI-13-N7 |
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Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177650 is on microarray TOM1: SGN-S1-1-1.2.6.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177650 [TUS-27-B16] | Trace: SGN-T193001 | EST: SGN-E391675 | Direction: 3' | Facility: INRA |
Clone: SGN-C177650 [TUS-27-B16] | Trace: SGN-T193002 | EST: SGN-E391676 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E268597 | Length: 527 bp (897 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268597 [] (trimmed)
GATGCTGCCGTCGCCGTTCTCTATCTCCGCCAATGAAATCTCTCACTGCCACTGCAGGTCTACTTCTTTCTACTTCTCCGCCGTCTTTACGATCT
TCTCTCTTACCAAGTCTTCGACCTCTTCTTTATCGAGCTCGCCTCCGCAACAAGCTTAATCTGAGAAGATTGGGAAATGGAACTTGCCGGGCAGA
GTTTGCAAACGATGTGCCTTACGCCGCTGCTATTGGTGCTTGCATTTTGAGCTCGTGGGTTTTCCCGACTACTTACACGGAGGAGGACGATGGTG
AATCCACAATTGATTCTGCTGATGCGAGGTTTGCTGTCATGGCAATTATCAGCTTCATTCCGTATTTTAATTGGATGAGTTGGGTTTTTGCGTGG
TTGGATACTGGGAAACCACGTTATGCAGTTTATGCTCTTGTGTATTTGGCTCCATATTTAAGCAACAACCTGTCTCTATCTCCTGAAGATAGCTT
TCTACCCATTGCTAGCATCCTCTTGTGCATCTTCCACATTCAGCTGGAAGCA
TCTCTCTTACCAAGTCTTCGACCTCTTCTTTATCGAGCTCGCCTCCGCAACAAGCTTAATCTGAGAAGATTGGGAAATGGAACTTGCCGGGCAGA
GTTTGCAAACGATGTGCCTTACGCCGCTGCTATTGGTGCTTGCATTTTGAGCTCGTGGGTTTTCCCGACTACTTACACGGAGGAGGACGATGGTG
AATCCACAATTGATTCTGCTGATGCGAGGTTTGCTGTCATGGCAATTATCAGCTTCATTCCGTATTTTAATTGGATGAGTTGGGTTTTTGCGTGG
TTGGATACTGGGAAACCACGTTATGCAGTTTATGCTCTTGTGTATTTGGCTCCATATTTAAGCAACAACCTGTCTCTATCTCCTGAAGATAGCTT
TCTACCCATTGCTAGCATCCTCTTGTGCATCTTCCACATTCAGCTGGAAGCA
Unigenes |
Current Unigene builds | |||||
[SGN-E268597] | SGN-U565729 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T82658 [Download] [View] | Facility Assigned ID: TGSBY76TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |