EST details — SGN-E268996
| Search information |
| Request: 268996 | Match: SGN-E268996 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C47496 | Clone name: cLEI-16-G8 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177674 is on microarray TOM1: SGN-S1-1-1.3.6.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177674 [TUS-27-C16] | Trace: SGN-T182995 | EST: SGN-E370620 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177674 [TUS-27-C16] | Trace: SGN-T182996 | EST: SGN-E370621 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268996 | Length: 523 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268996 [] (trimmed)
GGAGAGGGGTGCTAATGTGAAGAATGAGACTAGACCTAAGAACAGATAAAGAAGCAGATGGGCAATTGTGGTACTAGAGAAGAATCTGCTGTTGT
CTCCAATGCTCATCATCAAGTCCAGCAGCAGCAGGGGTTATCGTTGGGAAGCAGGATAGGTATTGATTCAAAGAAACATAGTCATAGTCGTTCTA
CATCAGATCTGAGTGATCCTTCGACTCCGAGAAACTTAGAGGATTTTAGAAAGAATGCTGTACTGTATACTCATATAATTGCATTTACTCTTTTT
GAGCTGGAGACAATTACTAAAAGCTTCCGATCTGATTATATACTTGGTGAGGGTGGTTTTGGAACTGTTTACAAGGGCTACATTGATGAGAATGT
TCGTGTTGGACTTAAGTCTTTGCCGGTTGCTGTCAAAGTACTTAACAAAGAGGGGCTTCAAGGTCACCGTGAGTGGCTTACTGAGGTCAACTTTC
TTGGACAGCTTAAGCATTCTAATCTTGTCAAGTTGATCGGGTATTGCT
CTCCAATGCTCATCATCAAGTCCAGCAGCAGCAGGGGTTATCGTTGGGAAGCAGGATAGGTATTGATTCAAAGAAACATAGTCATAGTCGTTCTA
CATCAGATCTGAGTGATCCTTCGACTCCGAGAAACTTAGAGGATTTTAGAAAGAATGCTGTACTGTATACTCATATAATTGCATTTACTCTTTTT
GAGCTGGAGACAATTACTAAAAGCTTCCGATCTGATTATATACTTGGTGAGGGTGGTTTTGGAACTGTTTACAAGGGCTACATTGATGAGAATGT
TCGTGTTGGACTTAAGTCTTTGCCGGTTGCTGTCAAAGTACTTAACAAAGAGGGGCTTCAAGGTCACCGTGAGTGGCTTACTGAGGTCAACTTTC
TTGGACAGCTTAAGCATTCTAATCTTGTCAAGTTGATCGGGTATTGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268996] | SGN-U578571 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83220 [Download] [View] | Facility Assigned ID: TGSCJ40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
