EST details — SGN-E268997
Search information |
Request: 268997 | Match: SGN-E268997 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C47486 | Clone name: cLEI-16-G20 |
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Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189231 [TUS-57-E5] | Trace: SGN-T348895 | EST: SGN-E548020 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E268997 | Length: 442 bp (865 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268997 [] (trimmed)
CTAACATGGCTCATGTCCTTATTATTGAACAATCCTCGCGTCATGAATAATGCTCAAAAAGAAATCGATCGTAAAGTCGGTAAAGATAGATGGAT
TGAAGAATCGGACATCAAAGATCTTGTCTATCTCCAGGCTATTGTTAAAGAAGCATTACGTTTATATCCACCAGCGCCTTTGTTAGTTCCACACG
AAGCTGTGGAAGATTGTACCGTGGCGGGGTACAACATCCCAAAAGGTACTCGTTTGTTCGCGAACGCATGGAAAATACAACGAGACCCTCGAGTT
TATTCAGAACCTGATAAGTTCATCCCAGAGAGATTCTTGAACGAACATTCAAATGTAGATGCTCGTGGTCAACATTTTGAGTTCATCCCGTTTGG
CTCTGGAAGACGATCTTGTCCCGGAATTAATTTCGCGACGCAAGTGGCGCACCTCACGATTG
TGAAGAATCGGACATCAAAGATCTTGTCTATCTCCAGGCTATTGTTAAAGAAGCATTACGTTTATATCCACCAGCGCCTTTGTTAGTTCCACACG
AAGCTGTGGAAGATTGTACCGTGGCGGGGTACAACATCCCAAAAGGTACTCGTTTGTTCGCGAACGCATGGAAAATACAACGAGACCCTCGAGTT
TATTCAGAACCTGATAAGTTCATCCCAGAGAGATTCTTGAACGAACATTCAAATGTAGATGCTCGTGGTCAACATTTTGAGTTCATCCCGTTTGG
CTCTGGAAGACGATCTTGTCCCGGAATTAATTTCGCGACGCAAGTGGCGCACCTCACGATTG
Unigenes |
Current Unigene builds | |||||
[SGN-E268997] | SGN-U565273 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T83221 [Download] [View] | Facility Assigned ID: TGSCJ46TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.986 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |