EST details — SGN-E269034
| Search information |
| Request: 269034 | Match: SGN-E269034 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C47467 | Clone name: cLEI-16-F21 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189228 [TUS-57-E2] | Trace: SGN-T339092 | EST: SGN-E538217 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189228 [TUS-57-E2] | Trace: SGN-T339093 | EST: SGN-E538218 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E269034 | Length: 644 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E269034 [] (trimmed)
TGAGTTATTTCATTGTGGAACAATTTGGCTGAGTTTTAGTTTTTTTCCACAAGTAGTAATAATTATATTTCAAGACTTTTACTATACTATCTATC
AATGGCTAGCCAACAACCACCTCGTCCATTGTTCCGTTTTGCTTCCATGGTTCGTCCGGCTGCACAACCTCCTCCAGCTTCTTCTCCACCAGCAC
CATCCCCACAACCGATGTTTCGACCTACCACCCCATTTAGGCCTGCCTCACCAGCAGTTACTGCTCCACAGCCCCCTCAACCTCCAGTACCTACT
GCTGCTACTCCTGTTGCAGTAGTTACTGCACCACCGCAACCACAAGCGCCAGCCCCAGGTAGCCCCATTTCACCACAGAGGCGTCAACCTGCTGA
GGTAACTTCACCACCAAGATCACCTGTAGCTCCTCCTCCTCAATCTGTTGTTTCGCCACCAAAGGCTCCTTCACCACGTTCTCCAGTAGCAGCAC
AACCACGAAGTGCTGCCACTGAGGTCCCTAAATCTCCTGTCATTAGAGCCTCTCCTGTCATTAGAACCACCACGTCAGTGCCACAATCTCCAGTC
AAGCCATTAGCTTCTAATGTAACAACAGAGAGCGCTCCAACTACTACTCCGTATGCTTCATCTCGGCCATCTCC
AATGGCTAGCCAACAACCACCTCGTCCATTGTTCCGTTTTGCTTCCATGGTTCGTCCGGCTGCACAACCTCCTCCAGCTTCTTCTCCACCAGCAC
CATCCCCACAACCGATGTTTCGACCTACCACCCCATTTAGGCCTGCCTCACCAGCAGTTACTGCTCCACAGCCCCCTCAACCTCCAGTACCTACT
GCTGCTACTCCTGTTGCAGTAGTTACTGCACCACCGCAACCACAAGCGCCAGCCCCAGGTAGCCCCATTTCACCACAGAGGCGTCAACCTGCTGA
GGTAACTTCACCACCAAGATCACCTGTAGCTCCTCCTCCTCAATCTGTTGTTTCGCCACCAAAGGCTCCTTCACCACGTTCTCCAGTAGCAGCAC
AACCACGAAGTGCTGCCACTGAGGTCCCTAAATCTCCTGTCATTAGAGCCTCTCCTGTCATTAGAACCACCACGTCAGTGCCACAATCTCCAGTC
AAGCCATTAGCTTCTAATGTAACAACAGAGAGCGCTCCAACTACTACTCCGTATGCTTCATCTCGGCCATCTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E269034] | SGN-U578736 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83258 [Download] [View] | Facility Assigned ID: TGSCK35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
