EST details — SGN-E270210
Search information |
Request: 270210 | Match: SGN-E270210 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C62204 | Clone name: cLEM-1-M6 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189281 [TUS-57-G7] | Trace: SGN-T339168 | EST: SGN-E538293 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E270210 | Length: 394 bp (721 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270210 [] (trimmed)
TTCAAGAATAACAAGAGGGCTTTGCCTGAGGATGAAGATTGTGAATCAAACTCCATTTCAGATCCCAAAACTCCACCTGTTGCCAAGACACAAAT
AGTAGGGTGGCCACCAGTAAGAGCTAACAGGAAAAATAGCTTTCCATCAAAGAAAGCAGAAGCTGAATGTGGGATGTATGTGAAAGTTAGTATGG
ATGGAGCCCCTTATCTTAGAAAAATTGATCTGAAATTGTACAAGGGTTATCCAGAACTGTTGAAGGCATTAGAGAAAATGTTCAAGCTGAGTATC
GGTGAATATTCAGAAAGGGAAGGGTATAAAGGGTCTGAATTTGCTCCTGCTTATGAAGATAAAGATGGTGACTTGATGCTTGTTGGAGATGTTCC
TTTTGAGTAAGTTA
AGTAGGGTGGCCACCAGTAAGAGCTAACAGGAAAAATAGCTTTCCATCAAAGAAAGCAGAAGCTGAATGTGGGATGTATGTGAAAGTTAGTATGG
ATGGAGCCCCTTATCTTAGAAAAATTGATCTGAAATTGTACAAGGGTTATCCAGAACTGTTGAAGGCATTAGAGAAAATGTTCAAGCTGAGTATC
GGTGAATATTCAGAAAGGGAAGGGTATAAAGGGTCTGAATTTGCTCCTGCTTATGAAGATAAAGATGGTGACTTGATGCTTGTTGGAGATGTTCC
TTTTGAGTAAGTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E270210] | SGN-U579749 | Tomato 200607 | Build 2 | 36 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T83583 [Download] [View] | Facility Assigned ID: TGFAB75TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.974 | Expected Error Rate: 0.0308 | Quality Trim Threshold: 14.5 |