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EST details — SGN-E270234

Search information 
Request: 270234Match: SGN-E270234
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C62246Clone name: cLEM-1-P1
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C180782 is on microarray TOM1: SGN-S1-1-5.1.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180782 [TUS-35-E4] Trace: SGN-T193612 EST: SGN-E392286 Direction: 5' Facility: INRA
Clone: SGN-C180782 [TUS-35-E4] Trace: SGN-T193859 EST: SGN-E392533 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E270234Length: 602 bp (840 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E270234 [] (trimmed) GCAACAAATTGCATTCTCCATTCTTGGAAGTGGCCATTCTTGATTTCTTGAAACAAAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAA
TTTGTAAGTCAAGAAACAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAA
AGTGGGTAATTTTGTTTGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTAAGTAAAGTTTGGAAGGTGA
CAAAAAGAAAGACAAAAATCTTGGAATTGTTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTATGGGTTGTTTCTCCTTGT
GACGTCTCAAATGGGACAAGTTTCATGGAATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAATTTGGTGTCCAATGAGAG
AATCAATAGAGGTGGTGGAAAGCAAACTAATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGATGA
CATCGGAACAGATGGTCTATGATGTGGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E270234] SGN-U580527 Tomato 200607 Build 2 240 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T83607 [Download] [View] Facility Assigned ID: TGFAC85TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5