EST details — SGN-E270480
| Search information |
| Request: 270480 | Match: SGN-E270480 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62263 | Clone name: cLEM-1-P8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177819 is on microarray TOM1: SGN-S1-1-8.1.6.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177819 [TUS-27-I17] | Trace: SGN-T182794 | EST: SGN-E371286 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177819 [TUS-27-I17] | Trace: SGN-T182795 | EST: SGN-E371287 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270480 | Length: 542 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270480 [] (trimmed)
GGTAAAGATGACGATGCACAATGCGATGATTCCCGCACAGGGGTTGAAGAGAGCGATTCGTCTGAAGATGAGGTTGATCCTCGTAATACTGTTGG
AGATGTTCCATTGAAATGGTACAAAGAAGAGGAACATATTGGATATGATCTTGCAGGGAAGAAGATTAAAAAAAAAGAGAGACAAGATAAATTAG
ACTCATTTCTTGCCAGTGTTGATGATTCCAAGAATTGGCGTAAGATTTATGATGAATATAATGATGAGGAAGTTGAACTCACGAAAGAAGAAGTC
AAGGTCATCAAAAGATTGCTGAAAGGAAAGGCACCTCATGCTGATTTTGATCCATATGCGCCTTATGTTGACTGGTTTTCCTGGGATGACTCCAA
ACATCCTCTTTCTAGTGCACCAGAACCAAAGAGACGTTTTATCCCTTCAAAATGGGAGAGTAAAAAGGTTGTCCAATATGTGCGGGCAATTCGAA
AGGGGCTTATAAAATTTGACGAGAAGCCAAAGGAAGAGCCAAGTGCCTACCTCTTATGGGGAGATGA
AGATGTTCCATTGAAATGGTACAAAGAAGAGGAACATATTGGATATGATCTTGCAGGGAAGAAGATTAAAAAAAAAGAGAGACAAGATAAATTAG
ACTCATTTCTTGCCAGTGTTGATGATTCCAAGAATTGGCGTAAGATTTATGATGAATATAATGATGAGGAAGTTGAACTCACGAAAGAAGAAGTC
AAGGTCATCAAAAGATTGCTGAAAGGAAAGGCACCTCATGCTGATTTTGATCCATATGCGCCTTATGTTGACTGGTTTTCCTGGGATGACTCCAA
ACATCCTCTTTCTAGTGCACCAGAACCAAAGAGACGTTTTATCCCTTCAAAATGGGAGAGTAAAAAGGTTGTCCAATATGTGCGGGCAATTCGAA
AGGGGCTTATAAAATTTGACGAGAAGCCAAAGGAAGAGCCAAGTGCCTACCTCTTATGGGGAGATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270480] | SGN-U563481 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83853 [Download] [View] | Facility Assigned ID: TGFAD88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
