EST details — SGN-E270652
| Search information |
| Request: 270652 | Match: SGN-E270652 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64657 | Clone name: cLEM-6-M21 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180888 is on microarray TOM1: SGN-S1-1-3.1.17.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180888 [TUS-35-I14] | Trace: SGN-T193637 | EST: SGN-E392311 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180888 [TUS-35-I14] | Trace: SGN-T193878 | EST: SGN-E392552 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270652 | Length: 546 bp (983 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270652 [] (trimmed)
GAAAATACAAAACCCCACTTCCCCTTTTCACTTTTGCTCACTCTAAGAGCATCTAAATCAACCTTAAGAGCTGTTACAATGTCGTATGATAAAGA
ACTTGATGCTGCCAAGAATGCTGCTTCTCTTGCTGCTCGCCTTTGTCAAAAAGTCCAAAAAGCACTGTTGCAAGCAGATGTTCAATCAAAGTCTG
ACAAATCTCCAGTGACGGTGGCTGATTATGGCTCACAGGCCGTGGTTAGCGTTGTTTTGCAGAAAGAGTTGTGTTCTGCTTCATTTTCATTAGTG
GCTGAGGAGGACTCTGGAGACCTTCGTAATGAAGAGGGAAAATCAACATTACAGCGTATCATGAAGCTTGTCAATGAAACACTTGCTAGTGATGG
AACATATGGTACTGCCCCATTATCTGAAGAAGATGTCCTTGCTGCCATTGATAGTGGTAGATCTGAAGGGGGTCCTTCTGGTCAGCACTGGGTGT
TGGATCCTATTGATGGTACTAAAGGGTTTCTAAGGGGAGACCAATATGCAATTGCATTGGGATTGCTAGAT
ACTTGATGCTGCCAAGAATGCTGCTTCTCTTGCTGCTCGCCTTTGTCAAAAAGTCCAAAAAGCACTGTTGCAAGCAGATGTTCAATCAAAGTCTG
ACAAATCTCCAGTGACGGTGGCTGATTATGGCTCACAGGCCGTGGTTAGCGTTGTTTTGCAGAAAGAGTTGTGTTCTGCTTCATTTTCATTAGTG
GCTGAGGAGGACTCTGGAGACCTTCGTAATGAAGAGGGAAAATCAACATTACAGCGTATCATGAAGCTTGTCAATGAAACACTTGCTAGTGATGG
AACATATGGTACTGCCCCATTATCTGAAGAAGATGTCCTTGCTGCCATTGATAGTGGTAGATCTGAAGGGGGTCCTTCTGGTCAGCACTGGGTGT
TGGATCCTATTGATGGTACTAAAGGGTTTCTAAGGGGAGACCAATATGCAATTGCATTGGGATTGCTAGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270652] | SGN-U566298 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84408 [Download] [View] | Facility Assigned ID: TGFAU83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
