EST details — SGN-E271172
| Search information |
| Request: 271172 | Match: SGN-E271172 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64100 | Clone name: cLEM-5-C11 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177836 is on microarray TOM1: SGN-S1-1-7.2.6.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177836 [TUS-27-J10] | Trace: SGN-T193028 | EST: SGN-E391702 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177836 [TUS-27-J10] | Trace: SGN-T193278 | EST: SGN-E391952 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271172 | Length: 504 bp (1025 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271172 [] (trimmed)
GGTGAATTATAACTAAACATTTTCTACTTCCTCTACAGAATCGCGTTGGTGTATCGATAATGAATCGGACCAAAATCAAGCGTAGAGTTGGTAAA
TATGAAGTTGGAAGGACAATTGGTGAGGGAACGTTTGCGAAAGTCAAGTTTGCAAAGAATTCAGAGACGGGAGAAAGTGTGGCGATCAAGATCCT
CGATAAAGATAAGGTCCTTAAGCACAAAATGGCTGAACAGATAAAGCGGGAAATAGCTACAATGAAGTTGATCAGACATCCTCATGTTGTACAGT
TATACGAGGTTATGGGAAGCAAGACGAAGATATTTATTGTTTTGGAGTTCGTTACAGGTGGAGAGTTATTCGATAAAATTGTAAATCATGGACGA
ATGCGTGAAGAAGAGGCAAGGAAGTATTTTCAGCAACTTATTCATACGGTTGATTATTGCCATAGTAGAGGAGTCTATCACCGAGATCTAAAGCC
TGAAAATTTACTGTTGGATTCTTCGGGTG
TATGAAGTTGGAAGGACAATTGGTGAGGGAACGTTTGCGAAAGTCAAGTTTGCAAAGAATTCAGAGACGGGAGAAAGTGTGGCGATCAAGATCCT
CGATAAAGATAAGGTCCTTAAGCACAAAATGGCTGAACAGATAAAGCGGGAAATAGCTACAATGAAGTTGATCAGACATCCTCATGTTGTACAGT
TATACGAGGTTATGGGAAGCAAGACGAAGATATTTATTGTTTTGGAGTTCGTTACAGGTGGAGAGTTATTCGATAAAATTGTAAATCATGGACGA
ATGCGTGAAGAAGAGGCAAGGAAGTATTTTCAGCAACTTATTCATACGGTTGATTATTGCCATAGTAGAGGAGTCTATCACCGAGATCTAAAGCC
TGAAAATTTACTGTTGGATTCTTCGGGTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271172] | SGN-U577671 | Tomato 200607 | Build 2 | 63 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84977 [Download] [View] | Facility Assigned ID: TGFAQ18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0099 | Quality Trim Threshold: 14.5 |
Working
