EST details — SGN-E271216

Search information 
Request: 271216Match: SGN-E271216
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C64114Clone name: cLEM-5-C24
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177843 is on microarray TOM1: SGN-S1-1-8.2.6.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177843 [TUS-27-J17] Trace: SGN-T1471 EST: SGN-E378277 Direction: 5' Facility: Giov. Lab
Clone: SGN-C177843 [TUS-27-J17] Trace: SGN-T183091 EST: SGN-E370854 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271216Length: 508 bp (887 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E271216 [] (trimmed) GCTGGATCATTTAGTTCAGAGGACCGATATTGACACATCAAGAATAGTAGTCTTTGGAAGGTCACTTGGAGGAGCTGTTGGCACTGTTCTTACCA
AAAACAATCCTGACAAGGTAGCTGGGCTCATTTTGGAGAATACTTTCACCTCTATCCTGGATATGGCAGGAGTTCTCTTGCCATTCTTGAAGTGG
GTCATTGGTGGCAGTGGCTCAAAGGGTTTCAAGCTTCTTAACTTTGTTGTTCGATCTCCATGGAATACCATTGATGTCATTGGTGAGATCAGGCA
ACCAATCCTCTTCCTATCTGGATTACAAGATGAGATGGTTCCACCATTCCACATGCAGATGCTGTATGCAAAGGCAGCGGCACGTAACAGGCAAT
GCTTATTTGTGGAATTTCCTAGTGGGATGCACATGGATACCTGGTTGGCAGGTGGTGATCATTATTGGAGGACAATTCAGAAATATTTGGAAGAA
ACTGTTCCAGAGAAGAAGGATGATGAATCAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271216] SGN-U572689 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85021 [Download] [View] Facility Assigned ID: TGFAR24TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5