EST details — SGN-E271318
| Search information |
| Request: 271318 | Match: SGN-E271318 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C64247 | Clone name: cLEM-5-J12 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177917 is on microarray TOM1: SGN-S1-1-6.1.6.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177917 [TUS-27-M19] | Trace: SGN-T182818 | EST: SGN-E371310 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177917 [TUS-27-M19] | Trace: SGN-T182819 | EST: SGN-E371311 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271318 | Length: 490 bp (626 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271318 [] (trimmed)
TTACCACAAGGTGCTGGCAAAGGACAAGCACTTGCATATCTGCTTAAGAAACTGAAGAGCGAGGGAAAATTACCAAGCAACACCCTTGCCTGCGG
TGACTCCGGGAATGACGCTGAGTTATTCAGTATCCCAGATGTGTATGGTGTAATGGTAGCTAATGCGCAGGAGGAATTACTGCAGTGGCATGCTG
CAAATGCAAAAAATAATCCCAAAGTAATTCATGCATCAGAGAGGTGTGCTGCCGGTATCATACAAGCCATTGGTCATTTCAACCTAGGTCCAAGT
ACCTCCCCAAGAGATGTTACAGATTTATCAGATTGCAAGATGGACAACTTTGTTCCTGCCTATGAAGTTGTCAAATTTTACCTGTTTTTTGAGAA
ATGGAGGCGTGGAGAAATTGAGCATTCTGAGCATTATCTGTCAAACCTGAAAGCAGTGTGTAGACCATCTGGTACTTTTGTTCACCCATCTGGTG
TTGAGAAATCCCTTC
TGACTCCGGGAATGACGCTGAGTTATTCAGTATCCCAGATGTGTATGGTGTAATGGTAGCTAATGCGCAGGAGGAATTACTGCAGTGGCATGCTG
CAAATGCAAAAAATAATCCCAAAGTAATTCATGCATCAGAGAGGTGTGCTGCCGGTATCATACAAGCCATTGGTCATTTCAACCTAGGTCCAAGT
ACCTCCCCAAGAGATGTTACAGATTTATCAGATTGCAAGATGGACAACTTTGTTCCTGCCTATGAAGTTGTCAAATTTTACCTGTTTTTTGAGAA
ATGGAGGCGTGGAGAAATTGAGCATTCTGAGCATTATCTGTCAAACCTGAAAGCAGTGTGTAGACCATCTGGTACTTTTGTTCACCCATCTGGTG
TTGAGAAATCCCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271318] | SGN-U575212 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85123 [Download] [View] | Facility Assigned ID: TGFAT54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0013 | Quality Trim Threshold: 14.5 |
Working
