EST details — SGN-E271918

Search information 
Request: 271918Match: SGN-E271918
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65321Clone name: cLEM-8-P20
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178409 is on microarray TOM1: SGN-S1-1-2.2.4.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178409 [TUS-29-B7] Trace: SGN-T184103 EST: SGN-E371034 Direction: 3' Facility: INRA
Clone: SGN-C178409 [TUS-29-B7] Trace: SGN-T184104 EST: SGN-E371035 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271918Length: 541 bp (962 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271918 [] (trimmed) AGCACACTTTTCCTCATCTTCAGAGCAATACAGTAATGGAGGAGACAAAAAATTCTCCTCCAATACAAAGGGTAGTGATAATCACACTACCACCA
CCTGACAACCCTTCTTATGGCAAAACCATAACAGCATTTACACTCTCAGATTCACCCACTCATCAGCAACAACAAGAACAAGAACAAGAAGAAGA
ACCACCACAACAAAGCCAACCGCATAACCAAGATGTAAATGCAGGCGTTCTTCATGTTTCCTTAGAAAGATCCTTCTTTTTCCGCCCTACAATCG
TTTTTGGACTTCTGGGTATCTCTCTGATTGCCTTGTCTTTTTGGTCTTCACTTACGCAAGAGACCCTTTTCGAATTACGTGATGTGGAACAGGAT
CATAAGAGTTCCAACAGTTCGCTTATTCTTCCTTTGTATCCTAAGCGTGGTGGTGCCTGGAATTCAAAGACGGATGTTGAATTCAAACTTGGGAG
GTTTGTGGATTTCAAACCGGATAACTTTATGGATCAAGAAAAGATTGCCAAGTCTCTTTCTGCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271918] SGN-U584523 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85469 [Download] [View] Facility Assigned ID: TGFBF94TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0146 Quality Trim Threshold: 14.5