EST details — SGN-E271962
| Search information |
| Request: 271962 | Match: SGN-E271962 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65045 | Clone name: cLEM-8-C4 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178238 is on microarray TOM1: SGN-S1-1-5.3.4.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178238 [TUS-28-K4] | Trace: SGN-T183372 | EST: SGN-E370182 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178238 [TUS-28-K4] | Trace: SGN-T183373 | EST: SGN-E370183 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271962 | Length: 503 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271962 [] (trimmed)
GCACAAACCTTACAAAAGCATCTTCTTTACGTTACACATTTGCCTTTCTGCCTGCCATCATTTTTTTTCCTCTCCAAATTATCAAAATTATTGCC
CCAGTTTCTCTCTGGTTTGGAACTGCATTTATCTATGGTTTAATTGAATTAATAAATTTTTTTTCTCTACTCTGTACCCGTCAATTTAAGTACAG
TTTCAGTTTTCGCAACAATTTTTTGGGATTTTGGCTCTGGCTTAGAGACATAACAAAAAGCGGTTATGGATCGAGAAGGAGGATCAGCCGGATCT
TGTTATTATTCAGTTCTAGGGGTACGCAACGACGCCTCCTGCTCCGACATTCGCTCAGCTTATCGGAAACTAGCTCTGAAATGGCACCCGGATAG
GTGGGCGAAGAATCCAGCGCTGGCCGGTGAAGCGAAACTCCGATTTCAGAAAATCCAAGAGGCTTATTCAGTTCTCTCCGATCAAGACAAGAGGT
CAATGTACGACGCCGGTTTCCTCGATAT
CCAGTTTCTCTCTGGTTTGGAACTGCATTTATCTATGGTTTAATTGAATTAATAAATTTTTTTTCTCTACTCTGTACCCGTCAATTTAAGTACAG
TTTCAGTTTTCGCAACAATTTTTTGGGATTTTGGCTCTGGCTTAGAGACATAACAAAAAGCGGTTATGGATCGAGAAGGAGGATCAGCCGGATCT
TGTTATTATTCAGTTCTAGGGGTACGCAACGACGCCTCCTGCTCCGACATTCGCTCAGCTTATCGGAAACTAGCTCTGAAATGGCACCCGGATAG
GTGGGCGAAGAATCCAGCGCTGGCCGGTGAAGCGAAACTCCGATTTCAGAAAATCCAAGAGGCTTATTCAGTTCTCTCCGATCAAGACAAGAGGT
CAATGTACGACGCCGGTTTCCTCGATAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271962] | SGN-U575113 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85513 [Download] [View] | Facility Assigned ID: TGFBD14TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0087 | Quality Trim Threshold: 14.5 |
Working
