EST details — SGN-E273402

Search information 
Request: 273402Match: SGN-E273402
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C68252Clone name: cLEN-3-N22
cartOrder Clone
Library Name: cLENOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: red ripe to over-ripe

Microarray: Alias clone SGN-C181020 is on microarray TOM1: SGN-S1-1-7.3.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181020 [TUS-35-O2] Trace: SGN-T193656 EST: SGN-E392330 Direction: 5' Facility: INRA
Clone: SGN-C181020 [TUS-35-O2] Trace: SGN-T193896 EST: SGN-E392570 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E273402Length: 632 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E273402 [] (trimmed) TAGCAATTTTGATTTGTATAGCCCTTCGGTTCCAGCTGCAAATTGGAGAGACTCCTTTTGCTTTTCAATGGCTCCTAATCCTCCCAGTCCAGAAG
AATTTCCAAGACCATGCAGGGAAATACTAATGGATTACTCCAAGAATGTGATGGAATTGGGCTGTTCCTTGCTTGGATTATTGTCAGAAGGTCTC
GGTCTTGATCCTTGTCATCTCGAAGATATGGATTGCGTGAAGGGGCTCGGTGTTGTGGGCCATTACTATCCACCATGCCCTCAACCAGAACTCAC
CATAGGCACCAATACACATTCTGATAATGATTTTATCACAGTGCTTCTACAAGATCATATCGGAGGACTCCAAGTCCTTCACCAGAATCAGTGGG
TTGATATTCCTCCTACATCTGCTGCTCTTGTGGTGAATATTGGAGATCTTTTGCAGCTCATTTCAAATGACAAGTACACAAGTGTTGAACAAACC
AGAGTATTGTCAAATAAAGTTGGACCAAGAATATCAGTTGCAAGCTTCTTCACTACTGGTCCATTTCCATCTCCGAAGCTCTATGGACCAATTGC
TGAATTGTTATCAGAAGATAATCCTCCGAAATATCGTGCAACCACAGTGACGGACTATAGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E273402] SGN-U580932 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T87998 [Download] [View] Facility Assigned ID: TRRAL83TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5