EST details — SGN-E273575
| Search information |
| Request: 273575 | Match: SGN-E273575 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C68466 | Clone name: cLEN-6-H18 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189512 [TUS-57-P22] | Trace: SGN-T339517 | EST: SGN-E538642 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189512 [TUS-57-P22] | Trace: SGN-T348965 | EST: SGN-E548090 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E273575 | Length: 495 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E273575 [] (trimmed)
CATCATTTTTATGGCTGTCGAGGTTGTCGGAGGTATTAAAGCCAACAGTCTTGCAATTTTGACGGATGCGGCTCATCTATTGTCAGATGTTGCAG
CTTTTGCAATATCCTTGTTTTCACTCTGGGCATCACGATGGGAGGCTAATCCACGCCAGTCCTATGGGTTTTTTAGAATTGAGATACTTGGGGCA
CTAGTTTCTATCCAAATGATATGGCTTCTAGCTGGGATCCTTGTTTACGAAGCCATTGCTCGACTTATACATGATACAGGTGAAGTTCAAGGTTT
CCTCATGTTTGTGGTGTCTGCATTTGGATTAGGAGTGAACCTCATCATGGCACTCTTGCTAGGTCATGATCACGGACACGGTCACGGTCATGGAC
ACAGCCACGGTCATGACCACGGCCATGAACACAGTCATAGTCATGAAGAGCATGCTCATAGCCACGGTGATCATGAACATGCCCACTGTGAGCAT
AAACATATACATGGAATTAG
CTTTTGCAATATCCTTGTTTTCACTCTGGGCATCACGATGGGAGGCTAATCCACGCCAGTCCTATGGGTTTTTTAGAATTGAGATACTTGGGGCA
CTAGTTTCTATCCAAATGATATGGCTTCTAGCTGGGATCCTTGTTTACGAAGCCATTGCTCGACTTATACATGATACAGGTGAAGTTCAAGGTTT
CCTCATGTTTGTGGTGTCTGCATTTGGATTAGGAGTGAACCTCATCATGGCACTCTTGCTAGGTCATGATCACGGACACGGTCACGGTCATGGAC
ACAGCCACGGTCATGACCACGGCCATGAACACAGTCATAGTCATGAAGAGCATGCTCATAGCCACGGTGATCATGAACATGCCCACTGTGAGCAT
AAACATATACATGGAATTAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E273575] | SGN-U573562 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88271 [Download] [View] | Facility Assigned ID: TRRAX45TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0227 | Quality Trim Threshold: 14.5 |
Working
