EST details — SGN-E273693
| Search information |
| Request: 273693 | Match: SGN-E273693 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C68551 | Clone name: cLEN-6-N8 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183431 is on microarray TOM1: SGN-S1-1-4.3.1.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T194915 | EST: SGN-E393589 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T194915 | EST: SGN-E399133 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T194916 | EST: SGN-E393590 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T194917 | EST: SGN-E393591 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T199568 | EST: SGN-E398242 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183431 [TUS-42-C13] | Trace: SGN-T199568 | EST: SGN-E399554 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E273693 | Length: 359 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E273693 [] (trimmed)
AAAACATGTAAATGGTTTTACTGTGGCCTATTGTTTTTTCACCTTTCCCAATTATAAATATCCACTGCCTCAACTGAGTAAACAACCAAAATTTG
TGTTCTATAAAAAGTTTTCATATTTAGTGATCACTAAAAAAAAATCAAGAAGATGTCGACTACTGTAGGCCAAGTCATTCGTTGCAAAGCTGCTG
TGGCATGGGAAGCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTCCGTCTTAAGATCCTCTATACTTCA
CTCTGTCATACTGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGA
TGTTCTATAAAAAGTTTTCATATTTAGTGATCACTAAAAAAAAATCAAGAAGATGTCGACTACTGTAGGCCAAGTCATTCGTTGCAAAGCTGCTG
TGGCATGGGAAGCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTCCGTCTTAAGATCCTCTATACTTCA
CTCTGTCATACTGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E273693] | SGN-U579420 | Tomato 200607 | Build 2 | 345 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88389 [Download] [View] | Facility Assigned ID: TRRAX76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0137 | Quality Trim Threshold: 14.5 |
Working
