EST details — SGN-E273901
Search information |
Request: 273901 | Match: SGN-E273901 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C68597 | Clone name: cLEN-7-B21 |
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Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C171792 [TUS-11-N14] | Trace: SGN-T352380 | EST: SGN-E551505 | Direction: 5' | Facility: Giovanni |
Sequence |
Sequence Id: SGN-E273901 | Length: 403 bp (729 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E273901 [] (trimmed)
CGATTCAGAAAAGATCAGGTCGTCTATGAACGAAAGAAGAATGCAGAAGATACCTGCATATAGTTGGATAGAGATTGATGGAATAGTTCATGAGT
TTCTTGTTGGAGATACATACCATCCAATATCAGATAACATATACGTCAAACTCGGTGAACTGAGCAAGGAGCTAAGAGAGGTAGGTTATGTTCCA
AGAACAGAATACGTTCTATTTGACATCGAAGAGGAGGAGAAGGAGCATTTCGTGGGGTGTCATAGTGAGAAGCTCGCGCTTGCATATGGCTTACT
AAGTACGAAACCTGGTGATGGTATCAGGATAATAAAGAATCTTCGTATCTGTGGTGATTGCCATACGTTCTTCAAGCTTGTCTCAATGATAACGG
GGAGAGAAATTATCTTACGAGAT
TTCTTGTTGGAGATACATACCATCCAATATCAGATAACATATACGTCAAACTCGGTGAACTGAGCAAGGAGCTAAGAGAGGTAGGTTATGTTCCA
AGAACAGAATACGTTCTATTTGACATCGAAGAGGAGGAGAAGGAGCATTTCGTGGGGTGTCATAGTGAGAAGCTCGCGCTTGCATATGGCTTACT
AAGTACGAAACCTGGTGATGGTATCAGGATAATAAAGAATCTTCGTATCTGTGGTGATTGCCATACGTTCTTCAAGCTTGTCTCAATGATAACGG
GGAGAGAAATTATCTTACGAGAT
Unigenes |
Current Unigene builds | |||||
[SGN-E273901] | SGN-U572790 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T88597 [Download] [View] | Facility Assigned ID: TRRBA11TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |