EST details — SGN-E274068
Search information |
Request: 274068 | Match: SGN-E274068 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C68884 | Clone name: cLEN-8-D14 |
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Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189530 [TUS-58-A16] | Trace: SGN-T339548 | EST: SGN-E538673 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C189530 [TUS-58-A16] | Trace: SGN-T339550 | EST: SGN-E538675 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E274068 | Length: 462 bp (906 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274068 [] (trimmed)
AGGAGTGAGACGAGGTTTTTCTGACCGCATTTTGAGATTTATTAGCTATGATCAAGATAGGCTTCTCTCCACTCATGAGAATCTTCATGGAGGGA
ACCCAATACAGAGTGCCAGTGCTAGTCATGATGGCCACATTCTAGTTACAGGGGCTGACGAGGGATTGGTTTGCGTTTGGAGGATTGGTAAAGAG
GCACCCCGTTCTGTAAGGCGCTTGCAGTTGGAGAAGACTCTCTGTGCTCATACAGGCAAAATCACATGCCTACAAGTCAGTCAGCCGTACATGAT
GATTGTGAGTGGATCAGATGACTGCACTGTTATCTTGTGGGACCTTAGCTCCATGGTTTTTGTTAGGCAGCTTCCTCAGATACCCGCTCCTGTTT
CAGCAATTTATGTGAATGATCTGACTGGAAACATTATGACTGCTGCTGGCGTAATGCTTGCTGTTTGGAGCATCAATGGGGA
ACCCAATACAGAGTGCCAGTGCTAGTCATGATGGCCACATTCTAGTTACAGGGGCTGACGAGGGATTGGTTTGCGTTTGGAGGATTGGTAAAGAG
GCACCCCGTTCTGTAAGGCGCTTGCAGTTGGAGAAGACTCTCTGTGCTCATACAGGCAAAATCACATGCCTACAAGTCAGTCAGCCGTACATGAT
GATTGTGAGTGGATCAGATGACTGCACTGTTATCTTGTGGGACCTTAGCTCCATGGTTTTTGTTAGGCAGCTTCCTCAGATACCCGCTCCTGTTT
CAGCAATTTATGTGAATGATCTGACTGGAAACATTATGACTGCTGCTGGCGTAATGCTTGCTGTTTGGAGCATCAATGGGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E274068] | SGN-U582780 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T88764 [Download] [View] | Facility Assigned ID: TRRBF19TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0225 | Quality Trim Threshold: 14.5 |