EST details — SGN-E275141
| Search information |
| Request: 275141 | Match: SGN-E275141 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69266 | Clone name: cLEN-9-J15 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180769 is on microarray TOM1: SGN-S1-1-2.4.17.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180769 [TUS-35-D15] | Trace: SGN-T196374 | EST: SGN-E395048 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180769 [TUS-35-D15] | Trace: SGN-T196375 | EST: SGN-E395049 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275141 | Length: 582 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E275141 [] (trimmed)
CAATGGCGGAAGTTACTAAAATTCTCCAACCAGTTCTTCTTCCTCCTTTCTTCCATAAACTAGACGGAACCACTAATTCCCATTTTAGATTGTGT
AGAAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCATGGGGTTG
CGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATG
TTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAA
TGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCAT
GAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGG
AAGCATCACAAA
AGAAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCATGGGGTTG
CGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATG
TTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAA
TGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCAT
GAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGG
AAGCATCACAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275141] | SGN-U563777 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89013 [Download] [View] | Facility Assigned ID: TRRBI56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 14.5 |
Working
