EST details — SGN-E276151
| Search information |
| Request: 276151 | Match: SGN-E276151 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C67733 | Clone name: cLEN-21-C9 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183069 is on microarray TOM1: SGN-S1-1-6.4.3.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183069 [TUS-41-D11] | Trace: SGN-T195621 | EST: SGN-E394295 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183069 [TUS-41-D11] | Trace: SGN-T195622 | EST: SGN-E394296 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276151 | Length: 575 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276151 [] (trimmed)
AAAATTCTGAAGTATTTCTCGAGGCATTAAGGCTCTTTTTCTCGAAAAGAGAGAAGGAAATTGGCCAGTTGGGTTTTGATAAGGACGACCAGTTG
GCTGTAGAGTTTGTCACTTCTGCAGCAAACATTCGTGCCGCTTCTTTTGGAATTCCATTACATAGCCTTTTTGAAGCTAAAGGTATTGCTGGCAA
TATTGTTCATGCCGTTGCAACAACAAATGCCATCATTGCAGGCTTGATTGTCCTTGAGGCAATCAAGGTGTTGCAAAATGATGTAAAAAGCTACA
GGATGACTTATTGCCTTGAACATCCGTCAAGAAAGATGCTTCTCATGCCAGTGGAGCCCTTCGAGCCAAACAAGTCTTGTTATGTTTGTTCCGAG
ACACCTTTAACGCTTGAGATTAATACTCATCGTTCGAAGTTGAGGGATTTTGTTGACAAGATTGTCAAAGAAAAACTTGGCATGAGCCTCCCATT
GATCATGCATGGGGTGGCACTTCTTTATGAGGTGGGCGATGATCTTGAGGAAGATGAGGTTGCAAATTATGCAGCAAACCTTGACAAGGTTCTAT
CTGAG
GCTGTAGAGTTTGTCACTTCTGCAGCAAACATTCGTGCCGCTTCTTTTGGAATTCCATTACATAGCCTTTTTGAAGCTAAAGGTATTGCTGGCAA
TATTGTTCATGCCGTTGCAACAACAAATGCCATCATTGCAGGCTTGATTGTCCTTGAGGCAATCAAGGTGTTGCAAAATGATGTAAAAAGCTACA
GGATGACTTATTGCCTTGAACATCCGTCAAGAAAGATGCTTCTCATGCCAGTGGAGCCCTTCGAGCCAAACAAGTCTTGTTATGTTTGTTCCGAG
ACACCTTTAACGCTTGAGATTAATACTCATCGTTCGAAGTTGAGGGATTTTGTTGACAAGATTGTCAAAGAAAAACTTGGCATGAGCCTCCCATT
GATCATGCATGGGGTGGCACTTCTTTATGAGGTGGGCGATGATCTTGAGGAAGATGAGGTTGCAAATTATGCAGCAAACCTTGACAAGGTTCTAT
CTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276151] | SGN-U571216 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91410 [Download] [View] | Facility Assigned ID: TRRDC17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
