EST details — SGN-E276232
Search information |
Request: 276232 | Match: SGN-E276232 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C67842 | Clone name: cLEN-21-J22 |
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Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E276232 | Length: 477 bp (922 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E276232 [] (trimmed)
TTGAGTGCTTTTCAATGTCTCCTAATCCTCCCAGTCCAGAAGAATTTCCAAGACCATGCAGGGAAATACTAATGGATTACTCCAAGAATGTGATG
GAATTGGGCTGTTCCTTGCTTGGATTATTGTCAGAAGGTCTCGGTCTTGATCCTTGTCATCTCGAAGATATGGATTGCGTGAAGGGGCTCGGTGT
TGTGGGCCATTACTATCCACCATGCCCTCAACCAGAACTCACCATAGGCACCAATACACATTCTGATAATGATTTTATCACAGTGCTTCTACAAG
ATCATATCGGAGGACTCCAAGTCCTTCACCAGAATCAGTGGGTTGATATTCCTCCTACATCTGCTGCTCTTGTGGTGAATATTGGAGATCTTTTG
CAGCTCATTTCAAATGACAAGTACACAAGTGTTGAACACAGAGTATTGTCAAATAAAGTTGGACCAAGAATATCAGTTGCAAGCTTCTTCACTAC
TG
GAATTGGGCTGTTCCTTGCTTGGATTATTGTCAGAAGGTCTCGGTCTTGATCCTTGTCATCTCGAAGATATGGATTGCGTGAAGGGGCTCGGTGT
TGTGGGCCATTACTATCCACCATGCCCTCAACCAGAACTCACCATAGGCACCAATACACATTCTGATAATGATTTTATCACAGTGCTTCTACAAG
ATCATATCGGAGGACTCCAAGTCCTTCACCAGAATCAGTGGGTTGATATTCCTCCTACATCTGCTGCTCTTGTGGTGAATATTGGAGATCTTTTG
CAGCTCATTTCAAATGACAAGTACACAAGTGTTGAACACAGAGTATTGTCAAATAAAGTTGGACCAAGAATATCAGTTGCAAGCTTCTTCACTAC
TG
Unigenes |
Current Unigene builds | |||||
[SGN-E276232] | SGN-U580932 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T91491 [Download] [View] | Facility Assigned ID: TRRDF59TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |