EST details — SGN-E277646
Search information |
Request: 277646 | Match: SGN-E277646 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C73833 | Clone name: cLER-6-G16 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189762 [TUS-58-K8] | Trace: SGN-T339946 | EST: SGN-E539071 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C189762 [TUS-58-K8] | Trace: SGN-T339949 | EST: SGN-E539074 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E277646 | Length: 407 bp (745 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277646 [] (trimmed)
TCATGATTCAACACTTGTATTTGTGCCATGCATGTCAACTACTAAGGCGTTTGATTTGTGGTCGGGCAAAAAGATGATGGATTTACGTGGCCACT
ATGAGAATGTGAACTGTTGTCTGTACAATTCACTGGACCAGGAACTATTGACAGGTGGTAATGACAGGAAAATTCTTGTGTGGTCTCCAAGTAGA
ACCACTACTGAGGAATTGGAAGGGAGGGAAGGGCAAGCTTTTGCGATCGACCAACATAATTGGAGCGACTGAGTAGCTCACAAAATTTCGGAGGT
TCCATGTCAAGTTCAACTCACAGCTTTGTTCATTCTACATTTGCTTGAACAACAAATATGTGTAATAATCTGGAATCTGATGTTGTACAACAATT
TGCTATTTCTATTTGAAAATCCTCTCT
ATGAGAATGTGAACTGTTGTCTGTACAATTCACTGGACCAGGAACTATTGACAGGTGGTAATGACAGGAAAATTCTTGTGTGGTCTCCAAGTAGA
ACCACTACTGAGGAATTGGAAGGGAGGGAAGGGCAAGCTTTTGCGATCGACCAACATAATTGGAGCGACTGAGTAGCTCACAAAATTTCGGAGGT
TCCATGTCAAGTTCAACTCACAGCTTTGTTCATTCTACATTTGCTTGAACAACAAATATGTGTAATAATCTGGAATCTGATGTTGTACAACAATT
TGCTATTTCTATTTGAAAATCCTCTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E277646] | SGN-U569796 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T93376 [Download] [View] | Facility Assigned ID: TPRAV44TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.959 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 12.5 |