EST details — SGN-E277646

Search information 
Request: 277646Match: SGN-E277646
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C73833Clone name: cLER-6-G16
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189762 [TUS-58-K8] Trace: SGN-T339946 EST: SGN-E539071 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C189762 [TUS-58-K8] Trace: SGN-T339949 EST: SGN-E539074 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E277646Length: 407 bp (745 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E277646 [] (trimmed) TCATGATTCAACACTTGTATTTGTGCCATGCATGTCAACTACTAAGGCGTTTGATTTGTGGTCGGGCAAAAAGATGATGGATTTACGTGGCCACT
ATGAGAATGTGAACTGTTGTCTGTACAATTCACTGGACCAGGAACTATTGACAGGTGGTAATGACAGGAAAATTCTTGTGTGGTCTCCAAGTAGA
ACCACTACTGAGGAATTGGAAGGGAGGGAAGGGCAAGCTTTTGCGATCGACCAACATAATTGGAGCGACTGAGTAGCTCACAAAATTTCGGAGGT
TCCATGTCAAGTTCAACTCACAGCTTTGTTCATTCTACATTTGCTTGAACAACAAATATGTGTAATAATCTGGAATCTGATGTTGTACAACAATT
TGCTATTTCTATTTGAAAATCCTCTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E277646] SGN-U569796 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93376 [Download] [View] Facility Assigned ID: TPRAV44TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0077 Quality Trim Threshold: 12.5