EST details — SGN-E277942
| Search information |
| Request: 277942 | Match: SGN-E277942 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73384 | Clone name: cLER-4-I19 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189700 [TUS-58-H18] | Trace: SGN-T339840 | EST: SGN-E538965 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189700 [TUS-58-H18] | Trace: SGN-T339842 | EST: SGN-E538967 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E277942 | Length: 547 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277942 [] (trimmed)
CCAACGGAAAACCGGCTATCCAAACGGTTTTTACCGTAGTAAAAACTGTTTGGATACGGGTCGGGGCTACTACGATGTGTATTTACGTGATTATG
CTTGCGTGTACCGTCGTGCCCGGGATGCTCGTGGCGATTCTCGAGACCCGCCCGTTTGTTCGGGTGGTTGTTGAGGTTATCGGGTCGGGTTTGGA
GCTCCATATGATGGCGGTTACTAGCTTGGCGCTCGTGGTATCGGTCAACGAAGGAATGTATGGGTTGGATGCTATTCGGGTCGGGTCGGATTTGA
TGGAGGGTAAACGGGTATGCGGGTGGGTTTTATCCGGGTTATTTGTTTTGTTTTCGGGTTTGGTTCGTGGCACGATGGAAATATCGATGGCGATG
GCGATGGACGGTTCGGATTTCAAGAGGATTGAATCAACGGTTGTGATTAACTTGTTGTGGGATAATGTGGTTTGGATTTTTTTGTATGGTTTAAT
GGGTCAATGGAGCTTTATTGTTACAACTGTTTTTTACTTTGATCTAAAAAAAAGAGATTCAACCAAAAGTGA
CTTGCGTGTACCGTCGTGCCCGGGATGCTCGTGGCGATTCTCGAGACCCGCCCGTTTGTTCGGGTGGTTGTTGAGGTTATCGGGTCGGGTTTGGA
GCTCCATATGATGGCGGTTACTAGCTTGGCGCTCGTGGTATCGGTCAACGAAGGAATGTATGGGTTGGATGCTATTCGGGTCGGGTCGGATTTGA
TGGAGGGTAAACGGGTATGCGGGTGGGTTTTATCCGGGTTATTTGTTTTGTTTTCGGGTTTGGTTCGTGGCACGATGGAAATATCGATGGCGATG
GCGATGGACGGTTCGGATTTCAAGAGGATTGAATCAACGGTTGTGATTAACTTGTTGTGGGATAATGTGGTTTGGATTTTTTTGTATGGTTTAAT
GGGTCAATGGAGCTTTATTGTTACAACTGTTTTTTACTTTGATCTAAAAAAAAGAGATTCAACCAAAAGTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E277942] | SGN-U582920 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92775 [Download] [View] | Facility Assigned ID: TPRAM58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 12.5 |
Working
