EST details — SGN-E278038
| Search information |
| Request: 278038 | Match: SGN-E278038 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73269 | Clone name: cLER-4-A21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189688 [TUS-58-H6] | Trace: SGN-T339819 | EST: SGN-E538944 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189688 [TUS-58-H6] | Trace: SGN-T339822 | EST: SGN-E538947 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E278038 | Length: 580 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278038 [] (trimmed)
GGTGAGGCTGTGTGGTTCAAGGTCGGATCCCAAATCTTCAGCGAGGGAGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAGAGCAT
CTTGGCCATGTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTGGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCT
ACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCCGAGGCATTTGCTGAGCTCAAGGGAAAGGAGATTAATAACGGGAGACTTGCT
ATGTTCTCTATGTTCGGATTCTGTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCATGCTGACCACCTTTGAGACCCGGATAACAA
CAACGCTTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATATCATAATATATTGATTGAATTTCGATTGTTTGATGGCCCTGTAAAGTAG
TTGTGACTTCATAGAATGGATTTTTCTTTGAAAATTCCTATGATTGCGTAGTTCTGAGTTACATTTTCCAAAGCTATGAATCAAATATTGCCACT
TTCATACCAG
CTTGGCCATGTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTGGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCT
ACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCCGAGGCATTTGCTGAGCTCAAGGGAAAGGAGATTAATAACGGGAGACTTGCT
ATGTTCTCTATGTTCGGATTCTGTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCATGCTGACCACCTTTGAGACCCGGATAACAA
CAACGCTTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATATCATAATATATTGATTGAATTTCGATTGTTTGATGGCCCTGTAAAGTAG
TTGTGACTTCATAGAATGGATTTTTCTTTGAAAATTCCTATGATTGCGTAGTTCTGAGTTACATTTTCCAAAGCTATGAATCAAATATTGCCACT
TTCATACCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E278038] | SGN-U578505 | Tomato 200607 | Build 2 | 231 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92871 [Download] [View] | Facility Assigned ID: TPRAM11TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0290 | Quality Trim Threshold: 12.5 |
Working
