EST details — SGN-E278991
Search information |
Request: 278991 | Match: SGN-E278991 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C72755 | Clone name: cLER-2-B4 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189630 [TUS-58-E20] | Trace: SGN-T339722 | EST: SGN-E538847 | Direction: 5' | Facility: INRA (MWG) |
Clone: SGN-C189630 [TUS-58-E20] | Trace: SGN-T348998 | EST: SGN-E548123 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E278991 | Length: 444 bp (557 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278991 [] (trimmed)
ACGGTTTCTACAAGCTATTGGCAGGAGACCAGATATCACACAAGGATTGAAGAAACTACAATGTCGAACCCTCATATTTGTTGGGGATAGTTCTC
CTTTCCATTCCGAGGCTCTCCACATGACTGCTAAATTGGATAGACGATTCAGTGCCTTAGTAGAGGTACAGGAGTGTGGATCAATGGTGACAGAA
GAACAGCCACATGCAATGTTGATACCAATGGAGTATTTCCTCATGGGATATGGACTATACAGACCTAACCAGTTCAGTGGCAGCCCAAGGAGTCC
TCTTAGTCCATCTTGTATCGCCCCCGAGCTTCTCTCTCCAGAGAGCATGGGGCTCAAACTCAAACCTATCAAGACCCGGATTGAATCCAAGCTCC
CCGGTGCACAATGATAATTTAATTTGTGTATTATATTGGAAAGAAAAAACCCTCTTTTTAAGTT
CTTTCCATTCCGAGGCTCTCCACATGACTGCTAAATTGGATAGACGATTCAGTGCCTTAGTAGAGGTACAGGAGTGTGGATCAATGGTGACAGAA
GAACAGCCACATGCAATGTTGATACCAATGGAGTATTTCCTCATGGGATATGGACTATACAGACCTAACCAGTTCAGTGGCAGCCCAAGGAGTCC
TCTTAGTCCATCTTGTATCGCCCCCGAGCTTCTCTCTCCAGAGAGCATGGGGCTCAAACTCAAACCTATCAAGACCCGGATTGAATCCAAGCTCC
CCGGTGCACAATGATAATTTAATTTGTGTATTATATTGGAAAGAAAAAACCCTCTTTTTAAGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E278991] | SGN-U570883 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T92709 [Download] [View] | Facility Assigned ID: TPRAH02TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0006 | Quality Trim Threshold: 14.5 |