EST details — SGN-E279432
| Search information |
| Request: 279432 | Match: SGN-E279432 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69529 | Clone name: cLER-11-D13 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184377 is on microarray TOM1: SGN-S1-1-2.2.16.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184377 [TUS-44-J23] | Trace: SGN-T198306 | EST: SGN-E396980 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184377 [TUS-44-J23] | Trace: SGN-T198307 | EST: SGN-E396981 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279432 | Length: 661 bp (852 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279432 [] (trimmed)
GAAAGTCAGTTTCCCCTAATGTGCAGACGTATAACATCTTAATTGACGGATATGGGCGCAAGCAGGAATTCGTGAGGTGTTTTGAGATTCTCGAG
GAGATGGAAAATAACGGATTGAATCCTAATGTAATTACCTATGGTTCTCTAATCAATTCTTTGTGCAAGGATGGTAGGCTTCTTGAAGCTGATGT
AGTCCTAAGTGATATGATCAGTAGAGGGGTTAAACCAAATGCGCAGGTCTATAATATGCTTATAGATGGACATTGTATGAGAGGAAGGATGACTG
ATGCTTTTAGATGCTTGGAGAAGATGCTACAAAGTGATGCGGAAACAACACTCGTTACATACAATACTCTATTAAATGGGCTTTGCAAAAAGGGT
AAGACCAAAGAAGCTGAGGAGTTGGTCGCGGATATTCAACTCAAAGGTTTCGTTCCAGATGTTATCACATACAATTCTTTAATCTCTGCGTATTC
AGATGCACGGGACAGTGAAAAGTGTTATGAAATGTATGAGAAGATGAAAACCTCTGGCATAAAACCTACAATCAACACAATTCATCCTCTAATTA
GAGTGTCCAAAGAGGGAAAGAATGGACTGGTGTCAATTGACAAAATTGTTGAAGAAATGTCCCAGATGGATCTTTCTCCTGACCGAGTTGT
GAGATGGAAAATAACGGATTGAATCCTAATGTAATTACCTATGGTTCTCTAATCAATTCTTTGTGCAAGGATGGTAGGCTTCTTGAAGCTGATGT
AGTCCTAAGTGATATGATCAGTAGAGGGGTTAAACCAAATGCGCAGGTCTATAATATGCTTATAGATGGACATTGTATGAGAGGAAGGATGACTG
ATGCTTTTAGATGCTTGGAGAAGATGCTACAAAGTGATGCGGAAACAACACTCGTTACATACAATACTCTATTAAATGGGCTTTGCAAAAAGGGT
AAGACCAAAGAAGCTGAGGAGTTGGTCGCGGATATTCAACTCAAAGGTTTCGTTCCAGATGTTATCACATACAATTCTTTAATCTCTGCGTATTC
AGATGCACGGGACAGTGAAAAGTGTTATGAAATGTATGAGAAGATGAAAACCTCTGGCATAAAACCTACAATCAACACAATTCATCCTCTAATTA
GAGTGTCCAAAGAGGGAAAGAATGGACTGGTGTCAATTGACAAAATTGTTGAAGAAATGTCCCAGATGGATCTTTCTCCTGACCGAGTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279432] | SGN-U565151 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94184 [Download] [View] | Facility Assigned ID: TPRBQ19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
