EST details — SGN-E279445
| Search information |
| Request: 279445 | Match: SGN-E279445 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69555 | Clone name: cLER-11-H12 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189837 [TUS-58-N11] | Trace: SGN-T340075 | EST: SGN-E539200 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189837 [TUS-58-N11] | Trace: SGN-T340078 | EST: SGN-E539203 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E279445 | Length: 707 bp (966 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279445 [] (trimmed)
AGAGTACTAATTAATTATCCATAATGGCTCTTCACAAAGATGTTAGTTTCCTTGCTTCCTTGCTTGTTCTTGGATTAATGTTTCTCCATGTAAGC
GCGGAGATAGACCAAGGTCGCGATATCATAAATCCTAAGCCTTGTACCAGAGAATGTGGTAATTTTAGCTATGCGATATGTCCACGTTCTGAAGG
AAGTCCAAGAACCCCCATATGTACCACATGTTGTGCAGGCTACAAAGGTTGCAAATATTACAACGCTAATGGAACTTTCATTTGTGAAGGACAAT
CTGACCCAAGAAAGCCAAACGAACATTGTCCCAAGGAATGTGATCGTAAGATTGCTTATTCAAAATGTCCCCATTCAGAAGGACCTACTAAAATT
ATACCCACTAAATGCACCACGTGTTGCACGGGATACAAGGGTTGCTACTATTACGGTAAAGACAACAAGTTTGTGTGTGAAGGACAGAGTAATGA
ACCCAAGGTTTGTACTCAACAATGTGATCCTAAAGTTGCCTACATGACTTGTCCACCTGAATCGACAAAACTTACTCGAGTTTGTGTCAATTGTT
GTACTGCAAAACCAGGGTGCAAACTCTATGGTCATGATGGATCTTTAATTTGTATCGGAGGTGTTAAACCTCATTAATAGTCCTTATATGTATGA
AATAAAAGCATGAATATATACTTATTATTGTCATGCTAAACA
GCGGAGATAGACCAAGGTCGCGATATCATAAATCCTAAGCCTTGTACCAGAGAATGTGGTAATTTTAGCTATGCGATATGTCCACGTTCTGAAGG
AAGTCCAAGAACCCCCATATGTACCACATGTTGTGCAGGCTACAAAGGTTGCAAATATTACAACGCTAATGGAACTTTCATTTGTGAAGGACAAT
CTGACCCAAGAAAGCCAAACGAACATTGTCCCAAGGAATGTGATCGTAAGATTGCTTATTCAAAATGTCCCCATTCAGAAGGACCTACTAAAATT
ATACCCACTAAATGCACCACGTGTTGCACGGGATACAAGGGTTGCTACTATTACGGTAAAGACAACAAGTTTGTGTGTGAAGGACAGAGTAATGA
ACCCAAGGTTTGTACTCAACAATGTGATCCTAAAGTTGCCTACATGACTTGTCCACCTGAATCGACAAAACTTACTCGAGTTTGTGTCAATTGTT
GTACTGCAAAACCAGGGTGCAAACTCTATGGTCATGATGGATCTTTAATTTGTATCGGAGGTGTTAAACCTCATTAATAGTCCTTATATGTATGA
AATAAAAGCATGAATATATACTTATTATTGTCATGCTAAACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279445] | SGN-U580847 | Tomato 200607 | Build 2 | 220 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94197 [Download] [View] | Facility Assigned ID: TPRBR42THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0109 | Quality Trim Threshold: 12.5 |
Working
