EST details — SGN-E279686
| Search information |
| Request: 279686 | Match: SGN-E279686 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73531 | Clone name: cLER-5-D1 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184321 is on microarray TOM1: SGN-S1-1-2.4.16.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184321 [TUS-44-H15] | Trace: SGN-T198290 | EST: SGN-E396964 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184321 [TUS-44-H15] | Trace: SGN-T198291 | EST: SGN-E396965 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E279686 | Length: 566 bp (841 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E279686 [] (trimmed)
TGTAGGGAGTGCTGCTATTGAACCGCTTTCTTGGGACTTGCGGCTCAAAATTGCCATAGGAGCAGCACGGGGCTTAGCGTTCTTACATACTTCAG
AAAAGAAAGTTATTTACAGAGACTTCAAAGCCTCAAACATACTGCTTGATGGGAATTACAATGCAAAAATATCAGATTTTGGCTTAGCTAAGTTG
GGGCCTTCCGGTAGTAACTCACACGTAACTACTCGTGTGATGGGCACATATGGTTATGCTGCTCCAGAATATGTTGAAACTGGTCATCTATATGT
AAAAAGTGATGTTTACGGATTTGGAGTGGTCGTGCTTGAGTTGCTGACTGGTTTACGAGCCCTCGACACCAAAAGACCAAACAGACAAGAGAAAT
TGGTGGACTGGGTGAAACCGATGCTGTCTAACAAAAGGAAGCTGAAGTCCATTATGGATGCTCGGATGGAAGGCCAATATTCTTCAAAAGCAGCA
ACCCTTGCTGCTCAGATTACTCTAAAATGTCTAGAGGTAGACCCAAAGAATCGACCTTCAATGAAAGAAGTAATGAACGTGTTGGAACAGA
AAAAGAAAGTTATTTACAGAGACTTCAAAGCCTCAAACATACTGCTTGATGGGAATTACAATGCAAAAATATCAGATTTTGGCTTAGCTAAGTTG
GGGCCTTCCGGTAGTAACTCACACGTAACTACTCGTGTGATGGGCACATATGGTTATGCTGCTCCAGAATATGTTGAAACTGGTCATCTATATGT
AAAAAGTGATGTTTACGGATTTGGAGTGGTCGTGCTTGAGTTGCTGACTGGTTTACGAGCCCTCGACACCAAAAGACCAAACAGACAAGAGAAAT
TGGTGGACTGGGTGAAACCGATGCTGTCTAACAAAAGGAAGCTGAAGTCCATTATGGATGCTCGGATGGAAGGCCAATATTCTTCAAAAGCAGCA
ACCCTTGCTGCTCAGATTACTCTAAAATGTCTAGAGGTAGACCCAAAGAATCGACCTTCAATGAAAGAAGTAATGAACGTGTTGGAACAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E279686] | SGN-U581802 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T93195 [Download] [View] | Facility Assigned ID: TPRAS13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
