EST details — SGN-E279925

Search information 
Request: 279925Match: SGN-E279925
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C74275Clone name: cLER-8-I16
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189806 [TUS-58-M4] Trace: SGN-T340022 EST: SGN-E539147 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C189806 [TUS-58-M4] Trace: SGN-T340024 EST: SGN-E539149 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E279925Length: 422 bp (765 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E279925 [] (trimmed) CACGGTGAGGCAGATTCAAAACTGAAGGCTCTAGAGAAGCATGTTCAAGAGGTTCACAGATCTGTACAGATTCTAAGAGATAAACAAGAACTTGC
CGAAACTCAAAAGGAGCTGGCCAAGCTTCAGCTTGCACAGAAAGGATCAACTTCATCTAGCAATTCTCAGCAGAACGAGGAGAGAAGTGCTCAAC
ACCTGTCTGATGACAAAAAAAGTGACGACGCACCTGAAGTGCATGGACAGCAACTGGCTCTTGCACTACCCCATCAAGTGGCACCCCAGGCTTCT
CTTACTAACCGACCTGTGGAGCAGCCACAACAGCCACCTGTGCCTCCTCCACAATCAATTCCACCCCAAAGTATGCCACAGTCACAAGGGTATTA
TTTACCCCCTCCTCAGATGGCAAATCAACAAGCTCCAACTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279925] SGN-U583083 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T93827 [Download] [View] Facility Assigned ID: TPRBD56TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5