EST details — SGN-E280389

Search information 
Request: 280389Match: SGN-E280389
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72116Clone name: cLER-1-D17
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184999 is on microarray TOM1: SGN-S1-1-4.4.12.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184999 [TUS-46-D21] Trace: SGN-T199024 EST: SGN-E397698 Direction: 5' Facility: INRA
Clone: SGN-C184999 [TUS-46-D21] Trace: SGN-T199086 EST: SGN-E397760 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E280389Length: 483 bp (727 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280389 [] (trimmed) TGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCC
GTAACGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGGCAACCCAAGCTTG
GTCCATGCACAGAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGA
GGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCCGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTA
AGAACGGCAGACTTGCTATGTTCTCTATGTTCGGATTCTTTGGTTAAGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCCCCTT
GCAGACCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280389] SGN-U578505 Tomato 200607 Build 2 231 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91943 [Download] [View] Facility Assigned ID: TPRAC21TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0085 Quality Trim Threshold: 14.5