EST details — SGN-E280588

Search information 
Request: 280588Match: SGN-E280588
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72127Clone name: cLER-1-D7
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185292 is on microarray TOM1: SGN-S1-1-7.1.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185292 [TUS-47-A2] Trace: SGN-T1889 EST: SGN-E378479 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E280588Length: 499 bp (728 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E280588 [] (trimmed) GTCCAAATGTTACTATCTCAAATAATAATCGCTATAATTCCTAGCGAGACGTTCCCTTTGGAAACTCGTTCAGCTGGTCAAAGTGTAACAGTGTG
TGTTAACTTGCTTTTCACGTTTGTTATGGCACAAGCATTTCTCTCAATGCTTTGTCATTTCAAGTATGGGATATTCTTGTTCTTCTCGGGGTGGA
TTTTTGTGATGTCGTTGTTCGTTTTCTTCTTGTTGCCTGAGACGAAGAATGTTCCTATTGAGGAGATGACGGAGAGGGTGTGGAAGCAACATTGG
CTGTGGAAGAGGTTTATGGTGGATGAAGATGATGTTGATATGATTAAAAAGAATGGACATGCTAACGGATATGATCCCACTTCTCGGTTGTAAAA
TAAAAAATAAAAGAATATTAGCGGTGTTTTACGTTGATTTTATCATAGTAAAGATGCGTAGAAATAAATCAAACATGCCAGAGAGAGATCAGAGT
CTACTGTCTAGTCTAGTGATATCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280588] SGN-U579712 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92142 [Download] [View] Facility Assigned ID: TPRAC16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5