EST details — SGN-E281769
| Search information |
| Request: 281769 | Match: SGN-E281769 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70244 | Clone name: cLER-14-A14 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184419 is on microarray TOM1: SGN-S1-1-8.4.16.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184419 [TUS-44-L17] | Trace: SGN-T198316 | EST: SGN-E396990 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184419 [TUS-44-L17] | Trace: SGN-T199982 | EST: SGN-E398656 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E281769 | Length: 552 bp (842 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E281769 [] (trimmed)
TGAAGGACGGTAGCAGGGGAGTCATGGACCCTGCAGCTGTCGATAGGATTATTGAGAAGCTATTAGAAGTTCGATTATCGAAGCCTGGCAAGTTG
GTGCAGCTTTCCGAGTCTGAAATCAAGCAACTATGTGTTTCCTCTAGAGATATCTTCGTTAAACAGCCAAATCTACTTGAACTTGAAGCACCCAT
CAAAATTTGCGGTGACATTCATGGGCAGTACAGTGATCTGTTGAGGCTTTTTGAATATGGTGGTTTTCCTCCGAAGGCTAACTACTTATTCTTGG
GTGATTATGTAGATCGTGGGAAGCAGAGCTTGGAAACAATATGCCTCTTGCTTGCCTATAAGATCAAGTATCCTGAGAACTTTTTCTTGCTTAGA
GGAAACCATGAATGTGCTTCTATAAATAGGATATATGGATTCTATGATGAGTGTAAGCGTCGGTTCAATGTGAAACTATGGAAGTCCTTTACAGA
CTGTTTTAATTGTCTTCCTGTAGCAGCACTTATCGATGAGAAGATATTATGCATGCATGGGGGTCTGTCCCCTGATC
GTGCAGCTTTCCGAGTCTGAAATCAAGCAACTATGTGTTTCCTCTAGAGATATCTTCGTTAAACAGCCAAATCTACTTGAACTTGAAGCACCCAT
CAAAATTTGCGGTGACATTCATGGGCAGTACAGTGATCTGTTGAGGCTTTTTGAATATGGTGGTTTTCCTCCGAAGGCTAACTACTTATTCTTGG
GTGATTATGTAGATCGTGGGAAGCAGAGCTTGGAAACAATATGCCTCTTGCTTGCCTATAAGATCAAGTATCCTGAGAACTTTTTCTTGCTTAGA
GGAAACCATGAATGTGCTTCTATAAATAGGATATATGGATTCTATGATGAGTGTAAGCGTCGGTTCAATGTGAAACTATGGAAGTCCTTTACAGA
CTGTTTTAATTGTCTTCCTGTAGCAGCACTTATCGATGAGAAGATATTATGCATGCATGGGGGTCTGTCCCCTGATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E281769] | SGN-U577760 | Tomato 200607 | Build 2 | 30 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95028 [Download] [View] | Facility Assigned ID: TPRCB07THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
