EST details — SGN-E282513
| Search information |
| Request: 282513 | Match: SGN-E282513 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71714 | Clone name: cLER-18-M8 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183227 is on microarray TOM1: SGN-S1-1-8.3.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183227 [TUS-41-K1] | Trace: SGN-T191500 | EST: SGN-E390174 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183227 [TUS-41-K1] | Trace: SGN-T191709 | EST: SGN-E390383 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282513 | Length: 510 bp (678 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282513 [] (trimmed)
CCCTTATCCTCTCTCTCTCACCACAATGCTCACTACAGCAGCAGCTATGATGGCCGGCTCAGCCACTCCCTTCCCGTCGACCTCCGTATATCTCG
CCGCTGGCGAACTGTCCTTATCAATCCCAGTACCTAAACCAACAAATTTCGCCGGCCGTTCATCCACTTTCCGCCGCAACTCCATCCTCCATTCC
ATCCGGGTCGAGAATCCAAATTCGGGTCGGGTCAATACTATCGTGTGCAAAGCTAACCGGTCCGCATACTCGCCACTGAACTCCGGGTCGAACTA
CGGCGACCGTCCACCGACTGAGATGGCTCCGCTTTTCCCCGGGTGTGATTACGAACACTGGCTTATAGTTATGGATAAGCCCGGAGGTGAAGGTG
CTACTAAACAGCAGATGATTGATTGTTACATACAAACATTGGCTAAAGTAGTTGGGAGTGAAGAAGAGGCCAAGAAGAAGATATACAATGTTTCA
TGCGAAAGATACTTCGGTTTTTGATGTGAGATTGA
CCGCTGGCGAACTGTCCTTATCAATCCCAGTACCTAAACCAACAAATTTCGCCGGCCGTTCATCCACTTTCCGCCGCAACTCCATCCTCCATTCC
ATCCGGGTCGAGAATCCAAATTCGGGTCGGGTCAATACTATCGTGTGCAAAGCTAACCGGTCCGCATACTCGCCACTGAACTCCGGGTCGAACTA
CGGCGACCGTCCACCGACTGAGATGGCTCCGCTTTTCCCCGGGTGTGATTACGAACACTGGCTTATAGTTATGGATAAGCCCGGAGGTGAAGGTG
CTACTAAACAGCAGATGATTGATTGTTACATACAAACATTGGCTAAAGTAGTTGGGAGTGAAGAAGAGGCCAAGAAGAAGATATACAATGTTTCA
TGCGAAAGATACTTCGGTTTTTGATGTGAGATTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282513] | SGN-U576315 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96309 [Download] [View] | Facility Assigned ID: TPRCR76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.990 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
