EST details — SGN-E282623
Search information |
Request: 282623 | Match: SGN-E282623 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C70758 | Clone name: cLER-15-M7 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178808 is on microarray TOM1: SGN-S1-1-3.2.2.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178808 [TUS-30-B22] | Trace: SGN-T184914 | EST: SGN-E372122 | Direction: 3' | Facility: INRA |
Clone: SGN-C178808 [TUS-30-B22] | Trace: SGN-T184915 | EST: SGN-E372123 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E282623 | Length: 466 bp (785 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282623 [] (trimmed)
GAAAGTTGTAAAGGGAGCATCAGCTAATACTGGATACGGAAAACGTGTGGAACATCTGAAATCAATCTTCAAAGCTTGTGGGATGAGTGTTGCTC
CTTTTCTTTATAAGAGAGCCAAACAGGTATCTGACGACAAACGTGAAGGCTTCCTGATAAAGGAGTTAGAAAAGATGCTTTCTGCAGAAGGACTA
TCATCGAACCCCACCGAAAAAGAAATCAAAGAAGTCAAAAAGAGAAAGCAAACAGCAAAAGAATTGGAAGGTATTGACTTAAGCAACATTGTTTC
AAATACACGAAGGAGATCAACGACCAGCTTTGTGGATCCTCCAAGACCCAAGTCACCACCTAAAAATGATAAGAATGATGACAAGGATGGTGATA
GCGATGCCGATGATGGAAGTGATGATGACAAAGACGATGATGACGATGAAGATGATGAGAGCAGTCAGAGTGATGAGGAGTTCAAT
CTTTTCTTTATAAGAGAGCCAAACAGGTATCTGACGACAAACGTGAAGGCTTCCTGATAAAGGAGTTAGAAAAGATGCTTTCTGCAGAAGGACTA
TCATCGAACCCCACCGAAAAAGAAATCAAAGAAGTCAAAAAGAGAAAGCAAACAGCAAAAGAATTGGAAGGTATTGACTTAAGCAACATTGTTTC
AAATACACGAAGGAGATCAACGACCAGCTTTGTGGATCCTCCAAGACCCAAGTCACCACCTAAAAATGATAAGAATGATGACAAGGATGGTGATA
GCGATGCCGATGATGGAAGTGATGATGACAAAGACGATGATGACGATGAAGATGATGAGAGCAGTCAGAGTGATGAGGAGTTCAAT
Unigenes |
Current Unigene builds | |||||
[SGN-E282623] | SGN-U566857 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T95143 [Download] [View] | Facility Assigned ID: TPRCE76THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.941 | Expected Error Rate: 0.0122 | Quality Trim Threshold: 14.5 |