EST details — SGN-E282713
Search information |
Request: 282713 | Match: SGN-E282713 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C70562 | Clone name: cLER-15-D6 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178730 is on microarray TOM1: SGN-S1-1-1.3.4.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178730 [TUS-29-O16] | Trace: SGN-T184026 | EST: SGN-E371697 | Direction: 3' | Facility: INRA |
Clone: SGN-C178730 [TUS-29-O16] | Trace: SGN-T184027 | EST: SGN-E371698 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E282713 | Length: 497 bp (806 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282713 [] (trimmed)
CAAGTCAGTGCTGAGCAACTCTGAGAAGCACAGCAAGTGGGATCACATTCTGGATTCTAGCATTTCTAAGGCATCGCTCAACGTTAGGAGCCAGA
TGTTAGCAGTCCTCAAATTGGCTCTAGCTTGTGTCAGTGTATCACCAGAAGGCCGGCCAAAGATGAAGAGTGTGCTTCGAGTGCTTCTCCATGCA
AGGTAATCGTACGTCAAAGGAGAAAGTCAAGGAGAAAACAGCCAAGATTGTTTTCTTCTTTTTCTTTTGGGGAGGAGCTGTAAGTGGTGAAGGTG
TTGTGATCTATGCAGAATATGCCAGTTTTGTCAGTTTATACATATTATATTAATGTAAACATATAGATATATGATGATAGTAGCTACATAACTTT
GAATATGATGTTAGTTCTCAGTGTAACATAGTCCATTTTTCTTGTTCATGTGTAATCATATATATATCATATCATATTATATTATAAGCGGGTAG
CCTCTACTTCAAAAGTTGAATT
TGTTAGCAGTCCTCAAATTGGCTCTAGCTTGTGTCAGTGTATCACCAGAAGGCCGGCCAAAGATGAAGAGTGTGCTTCGAGTGCTTCTCCATGCA
AGGTAATCGTACGTCAAAGGAGAAAGTCAAGGAGAAAACAGCCAAGATTGTTTTCTTCTTTTTCTTTTGGGGAGGAGCTGTAAGTGGTGAAGGTG
TTGTGATCTATGCAGAATATGCCAGTTTTGTCAGTTTATACATATTATATTAATGTAAACATATAGATATATGATGATAGTAGCTACATAACTTT
GAATATGATGTTAGTTCTCAGTGTAACATAGTCCATTTTTCTTGTTCATGTGTAATCATATATATATCATATCATATTATATTATAAGCGGGTAG
CCTCTACTTCAAAAGTTGAATT
Unigenes |
Current Unigene builds | |||||
[SGN-E282713] | SGN-U573289 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T95233 [Download] [View] | Facility Assigned ID: TPRCH15THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 12.5 |