EST details — SGN-E282713
| Search information |
| Request: 282713 | Match: SGN-E282713 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70562 | Clone name: cLER-15-D6 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178730 is on microarray TOM1: SGN-S1-1-1.3.4.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178730 [TUS-29-O16] | Trace: SGN-T184026 | EST: SGN-E371697 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178730 [TUS-29-O16] | Trace: SGN-T184027 | EST: SGN-E371698 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282713 | Length: 497 bp (806 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282713 [] (trimmed)
CAAGTCAGTGCTGAGCAACTCTGAGAAGCACAGCAAGTGGGATCACATTCTGGATTCTAGCATTTCTAAGGCATCGCTCAACGTTAGGAGCCAGA
TGTTAGCAGTCCTCAAATTGGCTCTAGCTTGTGTCAGTGTATCACCAGAAGGCCGGCCAAAGATGAAGAGTGTGCTTCGAGTGCTTCTCCATGCA
AGGTAATCGTACGTCAAAGGAGAAAGTCAAGGAGAAAACAGCCAAGATTGTTTTCTTCTTTTTCTTTTGGGGAGGAGCTGTAAGTGGTGAAGGTG
TTGTGATCTATGCAGAATATGCCAGTTTTGTCAGTTTATACATATTATATTAATGTAAACATATAGATATATGATGATAGTAGCTACATAACTTT
GAATATGATGTTAGTTCTCAGTGTAACATAGTCCATTTTTCTTGTTCATGTGTAATCATATATATATCATATCATATTATATTATAAGCGGGTAG
CCTCTACTTCAAAAGTTGAATT
TGTTAGCAGTCCTCAAATTGGCTCTAGCTTGTGTCAGTGTATCACCAGAAGGCCGGCCAAAGATGAAGAGTGTGCTTCGAGTGCTTCTCCATGCA
AGGTAATCGTACGTCAAAGGAGAAAGTCAAGGAGAAAACAGCCAAGATTGTTTTCTTCTTTTTCTTTTGGGGAGGAGCTGTAAGTGGTGAAGGTG
TTGTGATCTATGCAGAATATGCCAGTTTTGTCAGTTTATACATATTATATTAATGTAAACATATAGATATATGATGATAGTAGCTACATAACTTT
GAATATGATGTTAGTTCTCAGTGTAACATAGTCCATTTTTCTTGTTCATGTGTAATCATATATATATCATATCATATTATATTATAAGCGGGTAG
CCTCTACTTCAAAAGTTGAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282713] | SGN-U573289 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95233 [Download] [View] | Facility Assigned ID: TPRCH15THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 12.5 |
Working
