EST details — SGN-E283464
| Search information |
| Request: 283464 | Match: SGN-E283464 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69618 | Clone name: cLER-12-B16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185349 is on microarray TOM1: SGN-S1-1-6.3.9.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185349 [TUS-47-C11] | Trace: SGN-T192055 | EST: SGN-E390729 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185349 [TUS-47-C11] | Trace: SGN-T192298 | EST: SGN-E390972 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283464 | Length: 556 bp (987 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283464 [] (trimmed)
CAGATCGAGCAAAAATCAAAGGGGATGGCGCCGCCGAACACAGGATTAGCAGTGGGATTGAACAAAGGACACATTGTAACCAAGAAGGAGTTAGC
TCCACGCCCTTCTGACAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTCCATATGAGA
AGAGGATTACTGAGCTTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAAGAGGGCAAAGAAGAAG
AGAGAGGAGATGTCCAGCGTTCTCCGTAAGATGAGGGCAACCGGTGGTGGTGAAAAGAAGAAGTGAAGTCTCTATCCTTATTTTGACAATTGAGG
AACTGAGTTTATTAGTTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTCATTGAGATT
GTGACATTTTGCTCAAACAAGTCTACATTTTAGTTATGTTCTGTATTTTACATTTTTGTTAAATTGTTGATCCTTGTGATG
TCCACGCCCTTCTGACAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTCCATATGAGA
AGAGGATTACTGAGCTTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAAGAGGGCAAAGAAGAAG
AGAGAGGAGATGTCCAGCGTTCTCCGTAAGATGAGGGCAACCGGTGGTGGTGAAAAGAAGAAGTGAAGTCTCTATCCTTATTTTGACAATTGAGG
AACTGAGTTTATTAGTTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTCATTGAGATT
GTGACATTTTGCTCAAACAAGTCTACATTTTAGTTATGTTCTGTATTTTACATTTTTGTTAAATTGTTGATCCTTGTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283464] | SGN-U580851 | Tomato 200607 | Build 2 | 70 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94431 [Download] [View] | Facility Assigned ID: TPRBV08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 12.5 |
Working
