EST details — SGN-E283729
Search information |
Request: 283729 | Match: SGN-E283729 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C77020 | Clone name: cLES-1-G7 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C77020 [cLES-1-G7] | Trace: SGN-T97406 | EST: SGN-E283730 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E283729 | Length: 445 bp (840 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283729 [] (trimmed)
AAAAAGAGGAAGAAGATATGGCTTCTAATACATTGATGAGTTGTGGAATTCCAGCTGTTTGCCCCTCTTTCCTCTCTTCTACCAAGTCCAAATTC
GCCGCCGCGATGCCGGTGTCCGTTGGAGCTACCAACTCCATGTCTCGGTTCTCCATGTCAGCTGATTGGATGCCCGGGCAGCCCCGTCCATCTTA
CCTCGACGGCTCAGCCCCCGGAGATTTTGGATTTGATGCACTTGGTTTAGGAGAAGTACCTGCAAATTTGGAAAGATACAAAGAATCTGAACTTA
TTCATTGCAGATGGGCTATGCTTGCTGTTCCCGGAATCATAATACCAGAGGCCTTGGGCTTAGGTAATTGGGTCAAGGCCCAAGAATGGGCAGCC
ATTCCTGGTGGACAAGCTACATATTTGGGCCAGCCTGTTCCATGGGGAACACTTCCTACTATTTT
GCCGCCGCGATGCCGGTGTCCGTTGGAGCTACCAACTCCATGTCTCGGTTCTCCATGTCAGCTGATTGGATGCCCGGGCAGCCCCGTCCATCTTA
CCTCGACGGCTCAGCCCCCGGAGATTTTGGATTTGATGCACTTGGTTTAGGAGAAGTACCTGCAAATTTGGAAAGATACAAAGAATCTGAACTTA
TTCATTGCAGATGGGCTATGCTTGCTGTTCCCGGAATCATAATACCAGAGGCCTTGGGCTTAGGTAATTGGGTCAAGGCCCAAGAATGGGCAGCC
ATTCCTGGTGGACAAGCTACATATTTGGGCCAGCCTGTTCCATGGGGAACACTTCCTACTATTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E283729] | SGN-U580126 | Tomato 200607 | Build 2 | 162 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T97405 [Download] [View] | Facility Assigned ID: TPSAA40TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0110 | Quality Trim Threshold: 14.5 |