EST details — SGN-E284033
Search information |
Request: 284033 | Match: SGN-E284033 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C70095 | Clone name: cLER-13-I5 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189906 [TUS-59-A8] | Trace: SGN-T340194 | EST: SGN-E539319 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E284033 | Length: 475 bp (907 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284033 [] (trimmed)
CTATGACAGTGATGCCGGATCTTCCACCGGTTAAAACAAAGCTCGATAAACCAAATCCGACAGCTGAATCCAGAGAAACACCGGTTGCGAGTGCG
ACTGAAACCGGTGAAAGGACGGTTCAACAGCAACAACAGAGTTATCCAAGTAGTCCACTATGGCATTACCCAGCACCACCGGTGCAAACCATACC
CGTTTACTATGTCCCTGGTTCGGTTCAGCCAGGAAATATCCCGGTTCAACCCATTACATTAAGGGCTCCATATATTCATCCTTTTCCAGTTCCTC
CGAATCAATTACCCGTCGGGTATCCACCCGCTTCAAGTATGGGCCAAGTATATAGTGGATTGAGGCCGGTAATGAGTGTTGACCCGAATGAATTA
AGAGTTGTTACTGAAGGAATGAATTACTATGCAGTTAGGAATTCAGGAGTTGTTCCGGGTTACGGAGGTCCAGTTAGCGAAGAAATGCAGGGATC
ACTGAAACCGGTGAAAGGACGGTTCAACAGCAACAACAGAGTTATCCAAGTAGTCCACTATGGCATTACCCAGCACCACCGGTGCAAACCATACC
CGTTTACTATGTCCCTGGTTCGGTTCAGCCAGGAAATATCCCGGTTCAACCCATTACATTAAGGGCTCCATATATTCATCCTTTTCCAGTTCCTC
CGAATCAATTACCCGTCGGGTATCCACCCGCTTCAAGTATGGGCCAAGTATATAGTGGATTGAGGCCGGTAATGAGTGTTGACCCGAATGAATTA
AGAGTTGTTACTGAAGGAATGAATTACTATGCAGTTAGGAATTCAGGAGTTGTTCCGGGTTACGGAGGTCCAGTTAGCGAAGAAATGCAGGGATC
Unigenes |
Current Unigene builds | |||||
[SGN-E284033] | SGN-U585430 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T94727 [Download] [View] | Facility Assigned ID: TPRBW51TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0174 | Quality Trim Threshold: 12.5 |