EST details — SGN-E284587
Search information |
Request: 284587 | Match: SGN-E284587 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C77830 | Clone name: cLES-3-G3 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185441 is on microarray TOM1: SGN-S1-1-2.3.10.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185441 [TUS-47-G7] | Trace: SGN-T192067 | EST: SGN-E390741 | Direction: 5' | Facility: INRA |
Clone: SGN-C185441 [TUS-47-G7] | Trace: SGN-T192583 | EST: SGN-E391257 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E284587 | Length: 361 bp (763 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284587 [] (trimmed)
CTCCAGTGCAGCCTCCCTCTCTTCTTCTTCTAGGAGGCAGCAGCGCCGCTACTCTTTCTCCTCCACGACGAGCTCCGGCGAAATGTGTCCGACGC
CGTCCTCTTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAA
TAACAGAATCTCCAACGACAGTAAGCAACAGTTATTGGAGAGAACTAGCGAGGCGGTGCAACCAGCAACTCCGGCGATGCAGTGAAACCAGGCTA
GACTCACCGGCCAGGATCTTGATTTTTGAGTTCAAGGTTTTTAAGAATCCCTTTTTTAGAGGCGAAATCAGAATTT
CGTCCTCTTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAA
TAACAGAATCTCCAACGACAGTAAGCAACAGTTATTGGAGAGAACTAGCGAGGCGGTGCAACCAGCAACTCCGGCGATGCAGTGAAACCAGGCTA
GACTCACCGGCCAGGATCTTGATTTTTGAGTTCAAGGTTTTTAAGAATCCCTTTTTTAGAGGCGAAATCAGAATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E284587] | SGN-U575448 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T97608 [Download] [View] | Facility Assigned ID: TPSAI38TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.955 | Expected Error Rate: 0.0203 | Quality Trim Threshold: 14.5 |