Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E285603

Search information 
Request: 285603Match: SGN-E285603
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C78277Clone name: cLES-5-C24
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178939 is on microarray TOM1: SGN-S1-1-8.4.3.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178939 [TUS-30-H9] Trace: SGN-T184681 EST: SGN-E372241 Direction: 3' Facility: INRA
Clone: SGN-C178939 [TUS-30-H9] Trace: SGN-T184682 EST: SGN-E372242 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E285603Length: 500 bp (741 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E285603 [] (trimmed) GTTAAACCATTAATAATAGCGGTTTAACGAATTTCATGGAGAACAGTAGTAACAAAGAGACGGCGATGAGACTTAGAGAGGTGGCCGAAGGAGCA
GTAAAGGCGATTGGGTTAGGGTTTGATATAGTGGATGATTTGAGGTTGAAGTTTTGTAAGGATTATCAGTTGATCTCTGTTGACCATGATCAGGT
GCGAGACATTTCAATTCCTGGTGGAATTTTGGTTCAAAATGTTCCCAAATCTATCAATTGCGATAAAGGCGAACGCATGAGATTTACTTCTGATA
TTCTCTCTTTCTCCCAGATGTCCGAGCGATTTAATCAGGACCTATCCCTTTCTGGTAAGATTCCATCGGGCCATTTCAATGCTGCTTTTGAATAT
ACCACTTGTTGGCAAAAAGACGCTGCCTACACGAAAGCTCTTGCTTTTGATGGGGTCTTCATAACACTCTATAACATTGCATTAGAGAAGGCTCA
AGTTGTACTGCGTGATCATGTTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E285603] SGN-U566243 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T98086 [Download] [View] Facility Assigned ID: TPSAR24TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0090 Quality Trim Threshold: 14.5