EST details — SGN-E285829
Search information |
Request: 285829 | Match: SGN-E285829 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C78530 | Clone name: cLES-5-P13 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185465 is on microarray TOM1: SGN-S1-1-2.4.10.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185465 [TUS-47-H7] | Trace: SGN-T192613 | EST: SGN-E391287 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E285829 | Length: 467 bp (763 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E285829 [] (trimmed)
AATTCTCTGTTTGGTGGAAATGAATTCCATTCCTTTCTCCATTGTTACATACATACCTTCAAAGCAGCCATTGTTACACTGTACCAAAACTTCCC
AAACAACAACAGATCCAATTCCACATTTTATCAAATCCTCAATACTCTCGTCTTCTTCGAAATCTGTGAATAAACTCGCAGAAAAAATTAGTCCA
TTGCCTTCTTCGTTCAGTAGAAGAGAAACCCTAAGTGCTTGCGGTTTGGGTTTTTCGGCGGTTTTGTTCGAGGCTCTTTTGCAGCCACAGTCGAA
TATTGAAGCAATTGCTGAAGAAGCTGCAGCTACGGAATGTGAGTTCACAGTTACACCTTCAGGTCTTGCTTATTGTGATAAAGCTGTAGGTTATG
GACCTGAAGCTGTTAAAGGACAATTGATCAAGGCACATTATGTAGGTAAACTGGAAAATGGGAAGGTCTTCGATAGCAGCTATAATC
AAACAACAACAGATCCAATTCCACATTTTATCAAATCCTCAATACTCTCGTCTTCTTCGAAATCTGTGAATAAACTCGCAGAAAAAATTAGTCCA
TTGCCTTCTTCGTTCAGTAGAAGAGAAACCCTAAGTGCTTGCGGTTTGGGTTTTTCGGCGGTTTTGTTCGAGGCTCTTTTGCAGCCACAGTCGAA
TATTGAAGCAATTGCTGAAGAAGCTGCAGCTACGGAATGTGAGTTCACAGTTACACCTTCAGGTCTTGCTTATTGTGATAAAGCTGTAGGTTATG
GACCTGAAGCTGTTAAAGGACAATTGATCAAGGCACATTATGTAGGTAAACTGGAAAATGGGAAGGTCTTCGATAGCAGCTATAATC
Unigenes |
Current Unigene builds | |||||
[SGN-E285829] | SGN-U574476 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T98312 [Download] [View] | Facility Assigned ID: TPSAS91TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 14.5 |