EST details — SGN-E286142
Search information |
Request: 286142 | Match: SGN-E286142 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C75188 | Clone name: cLES-13-D10 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190429 [TUS-60-G3] | Trace: SGN-T341092 | EST: SGN-E540217 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190429 [TUS-60-G3] | Trace: SGN-T341095 | EST: SGN-E540220 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E286142 | Length: 485 bp (826 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286142 [] (trimmed)
GCGTCATTCAGTATAGCGTAGACCACGAATGACACAGGTTCTCCGAGCCTTGGAAGGAGATGTCTCATTATCGGACCTTAACGAAGGGATTAAAC
CTGGACACAGCACAGTATACAGTTCATATACAAGTTCAGATTACGACACACTTCAATACAACGAAGACATGAAGAAATTCAGGAAGATGGCACTC
GCGACAAGTCAAGAATATGCCAGCAGTGATCAGTACAGTAATCCAACGAGCGAATATGGACTAAACCCGTCTGGATCAAGTAGCGAAGGCCATCA
AACTGCGGAAATGGAAACGGGTCGGATGAGAAAAGACAGCAGAGGATTCAGTGGAAGTAAAGGCTTCAGTGGAACTTCTTAGTACACAAGAAACT
CCATTTCTGTATAGTCTTTTCAACCTCTAACTCTTTTATAACATGAATGCTTCCACAATGATGATTTATTTTGGTCAATATACAGATTTTTTTTT
CCCCTTTTTT
CTGGACACAGCACAGTATACAGTTCATATACAAGTTCAGATTACGACACACTTCAATACAACGAAGACATGAAGAAATTCAGGAAGATGGCACTC
GCGACAAGTCAAGAATATGCCAGCAGTGATCAGTACAGTAATCCAACGAGCGAATATGGACTAAACCCGTCTGGATCAAGTAGCGAAGGCCATCA
AACTGCGGAAATGGAAACGGGTCGGATGAGAAAAGACAGCAGAGGATTCAGTGGAAGTAAAGGCTTCAGTGGAACTTCTTAGTACACAAGAAACT
CCATTTCTGTATAGTCTTTTCAACCTCTAACTCTTTTATAACATGAATGCTTCCACAATGATGATTTATTTTGGTCAATATACAGATTTTTTTTT
CCCCTTTTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E286142] | SGN-U582338 | Tomato 200607 | Build 2 | 22 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T100455 [Download] [View] | Facility Assigned ID: TPSBZ17TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.965 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 12.5 |