EST details — SGN-E286780
| Search information |
| Request: 286780 | Match: SGN-E286780 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75625 | Clone name: cLES-14-N16 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184368 is on microarray TOM1: SGN-S1-1-3.2.16.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184368 [TUS-44-J14] | Trace: SGN-T198410 | EST: SGN-E397084 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184368 [TUS-44-J14] | Trace: SGN-T198411 | EST: SGN-E397085 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286780 | Length: 598 bp (826 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286780 [] (trimmed)
CAGATCAAAGGAACCAATGTACTCCTTGACAAAGACCTAAATCCAAAGATCTCAGACTTTGGTCTGGCCAAACTTCATGACGAGGAGAAAACACA
TGTCACCACCAGGGTTGCTGGGACTATAGGTTATATGGCCCCTGAATATGCACTCTGGGGTTATTTAACACATAAAGCAGATTTATACAGTTTTG
GAGTGGTTGTATTGGAACTCGTTGCTGGGAAGAACAACATGAAATATCATCCTGATGAGAATTATGTTTGTCTTCTTGATTGGGCCCTGGTTCTA
CAAAAAAAGGGTAAGTTTTTGGAGCTAGTAGACCCAAGGTTAGGTTCCTATTACGACAAGGAGGAGGCGTTGAGGATGATTAAAGTGGCCTTACG
ATGTACTAATCCATCTCCAGCACTAAGGCCAAACATGTCTGCAGTAGTAAACATGCTTGAAGGTCGTTTGAACGTTGACGAGTCTAACATCGATT
CAAGTGGCTACGATGATGAATTTAATTTTCAAGGTTTAAGAGACAAATATGATGAGATGCAAGTAACTTCTAGTGAAAACCAATCAGTCCTTTTT
TCAACTGGCACAAAGGGTACTGATCACT
TGTCACCACCAGGGTTGCTGGGACTATAGGTTATATGGCCCCTGAATATGCACTCTGGGGTTATTTAACACATAAAGCAGATTTATACAGTTTTG
GAGTGGTTGTATTGGAACTCGTTGCTGGGAAGAACAACATGAAATATCATCCTGATGAGAATTATGTTTGTCTTCTTGATTGGGCCCTGGTTCTA
CAAAAAAAGGGTAAGTTTTTGGAGCTAGTAGACCCAAGGTTAGGTTCCTATTACGACAAGGAGGAGGCGTTGAGGATGATTAAAGTGGCCTTACG
ATGTACTAATCCATCTCCAGCACTAAGGCCAAACATGTCTGCAGTAGTAAACATGCTTGAAGGTCGTTTGAACGTTGACGAGTCTAACATCGATT
CAAGTGGCTACGATGATGAATTTAATTTTCAAGGTTTAAGAGACAAATATGATGAGATGCAAGTAACTTCTAGTGAAAACCAATCAGTCCTTTTT
TCAACTGGCACAAAGGGTACTGATCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286780] | SGN-U570003 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100601 [Download] [View] | Facility Assigned ID: TPSCD80TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
